Bifidobacterium bifidum PRL2010: BBPR_0428
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Entry
BBPR_0428 CDS
T01340
Name
(GenBank) DNA helicase
Organism
bbp
Bifidobacterium bifidum PRL2010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
AAA_22
AAA_16
AAA_19
UvrD-helicase
NB-ARC
ATPase
Motif
Other DBs
NCBI-ProteinID:
ADP35537
UniProt:
A0A0H3E8I8
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All DBs
Position
532160..536443
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AA seq
1427 aa
AA seq
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MKAVEALLEGESGKALLVVGAPCVGKSTLARDALMAGLRRFGESGAIMTVSGRQIADVIG
DQVIRELGATSQARPVTTLSAIAFRLITVMRSRSGEPLPRLLNGAEQDALLRSVCSVHVA
HVRAGDPCGTCSLLREYFARDDWDGVLADAVAGNDGEGGDADSGVGVNAAFVMQLRDMLA
RMDELGVSEDREGTALSALRHWSPRVERLHVQWRLAFALRREYETAVSRMYSGEYRLDSS
RLLVEGAKAVGMVGDDDLPRLLVVDDCQDLTFAGFTFLKALRGAGTRLLLVGNPDEAVQT
FRGSYPEYLFDQIRRQLGADMVRLSAGGAGNGRVEERAVDHVDGYTYRDLVASRISLSIR
STQDETVPLPQRPGKLPQLPASLPIVALPQADPLPGDGSLKTALYRSADEETEDVVWRIK
QAHILEGRNWNDMAVIAHDNATVRTIGERLRHDGVPVRYSSVTRPLKDEPFVQGLFALLE
LAMLRNQTVPALGMNLQQTALYVRSRVATVMGCPLVSVGGGRDHEGYPARLEPVDAAMNA
LASLGKIVTCEDICKGDASDDVPGGAADDAGKTGDAGIAGDTARMHALGRLMHGWEQWRE
WVVSGRDRKTITDDTIIDVKAPQGDELQFGVDAMYLLLEFADDAHAMHGGVAGLGGTGDV
VDDAGSAVGAGTKGASGITADDVLAAVQEVCGRGDPHSRVFAHLWNLVGTVAQGLRQLPA
KEPQYALSVAWNACDVASRWQREALNNTDAGRAANDRLDTAMRLFDYASGSAASRDLPEF
FAQVRAMRIEADSLAKVAPIDEAVTLTTPAGSAGRHWPLVWIPAIQQGIWPNLAARNTMF
GGEDLADVMLYGGLSDDSGEHGDNKLESVLYAEQKSLLVALTRASEQVTASAVYNDDLTP
SDFLYGYMPERFNRERHASAEGREYSQVGEAGRLQGLDADPRGLVAAARVALAVYPRGSK
ESQDAVDALRLLASNGVEAADITRWPFLDEVEDASSGSRTVGSRAAAPEPDKAAEGTGQS
SVPRIATLSPSAVDSIWGCPVCWMMENRFTGPRAGSVATSFGSLIHAVAETASNEGLDAA
DWRDDLPIPERVSTVRDRMIAIYEELRDDPTANTNPADQYNATRKDNTAHDVLGHIASYF
VMSNTDEYPVNNVKNFRIGILESAQCERSFIAVFGLDDILAAYNAMDGVDPIGRDELAAI
MGSLVGGWPEAMNDRLTVRLSGRIDRMETRIMPDGKRHVRLIDYKTGKVPSTKAIFNDLQ
LVCYQLGLAFPENGPRGAEALQVMPDIAQSGLFHVAQKDAPATSGTSNAQEGMYQPALFA
DGSLNTSSFMPRNRYKTLDKLSDAPDLIEEPPTGVSAAAWRQFLGMRGTQAVWSLSMIAR
VFYAAAASRSTHIQARPKPDHLQYCRMKAACPACAGEINTVFETRQS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggttgaagcactgcttgagggggaatccggcaaggcgctgctggtggttggt
gctccttgcgtgggcaagagcacgctggcccgtgatgccttgatggccgggctgcgacgg
ttcggcgaatccggagcgataatgacggtatccgggcgtcagatcgccgatgtgataggc
gatcaggtgattcgcgagctgggggcgacctcccaggcgcgaccggtcacgacgctgtcg
gccatcgcgttccggctgatcaccgtcatgcgttcgaggtcgggcgagccgctgccgagg
ttgctgaacggcgccgagcaggatgcgctgctgcgttcggtgtgctccgtccatgtggct
catgtgcgggcgggggatccatgcggcacgtgttcgttgctgcgcgaatacttcgccagg
gatgattgggacggcgtgctggccgatgccgtggccgggaacgacggcgagggtggtgat
gcggattccggcgtaggcgtcaatgccgccttcgtcatgcagctgcgcgacatgttggcc
cgcatggatgagctgggcgtctccgaggatcgtgaaggaacggccctgtcggcgttgagg
cattggtcgccgcgcgtcgagcgtttgcatgtgcagtggcgtctcgcgttcgcgttgcgc
cgcgaatacgagaccgcggtgagtcgtatgtactcgggcgagtaccggttggactcgtcg
cgtctgctggtcgagggggccaaggcggtcgggatggtcggcgatgacgatctgccgcgt
ctgctggtcgtcgacgactgtcaggacctcaccttcgccgggttcacgttcctgaaggcg
ctgcgcggtgcggggacgcggctgctgctggtcggcaatccggacgaggccgtgcagacc
ttccgcgggtcatatccggaatacctgttcgaccagattcgtcgtcagcttggcgccgac
atggttcgtctgtcggctggcggtgccggaaatggccgagttgaggagcgtgcggtggac
cacgtcgacggttatacgtatcgcgatctggtcgcatcccgtatctccctgtccatccga
tccacgcaggacgagacggttcctctgccgcagaggccgggcaaattgccgcagctgccg
gcgagcctgccgattgtcgcattgccccaggccgatccgctgccgggcgatggcagtctg
aaaaccgcgctgtaccgctcggccgacgaagagacggaagacgtcgtatggcgcatcaag
caagcccacatccttgaaggacgcaactggaacgacatggctgtcatcgcgcacgacaac
gccaccgtgcgcacgatcggcgaacggctgcgtcatgacggcgtgcctgtacggtattca
tcggtcacacgaccgttgaaggacgagccgttcgtgcagggattgttcgcgctgctcgaa
ttggcgatgctcaggaaccagacggtgcccgcgctgggcatgaatctgcagcagaccgca
ctgtatgtgcgctctcgggttgccacggtgatgggatgcccgctggtcagcgtcggcggc
ggacgggatcatgagggatatccggccaggctggagccggtggacgccgccatgaacgcg
ttggcatcactcggcaagatcgtcacgtgcgaggacatatgcaagggggatgcgtccgac
gatgtgcctggcggtgccgccgacgatgcggggaagaccggggacgctggaattgctggt
gacaccgctcgaatgcatgccttgggcaggctcatgcacggatgggagcaatggcgcgaa
tgggtcgtctccgggcgcgatcggaagaccatcaccgacgacacgatcatcgatgtcaaa
gcaccgcaaggcgacgaactccagttcggcgtcgatgccatgtacctgttgctggaattc
gcggatgacgcgcatgcgatgcatggcggtgtcgccggtctaggcggtacaggtgacgtt
gtcgacgatgccggttccgctgtcggggcaggcacgaagggcgcgtccggtataaccgcc
gatgacgtgctcgccgccgttcaggaggtgtgcgggcggggagacccgcattcccgcgtg
tttgcccacctgtggaatctagtggggacggtggcccaaggcctgagacaactgccggcg
aaggaaccacagtatgcgttgtccgtggcttggaacgcgtgcgacgtcgcctcccgttgg
cagcgcgaggccctgaacaacacggatgccggacgtgccgccaacgaccgtctggatacg
gccatgcggctgttcgattatgcatccggctcggccgcaagccgggatctgcccgaattc
tttgcgcaggtgagggcgatgcgcatcgaagcggattccctggccaaagtggcccccatc
gacgaggccgtgacgctgaccacgccggcgggctccgcggggagacactggccgttggtg
tggattccggccatccagcaaggcatatggccgaacctggcagcccgaaacacgatgttc
ggtggtgaggatctggctgatgtcatgctgtatggagggctgtccgatgattccggagag
catggcgacaacaaactggaatccgtgctgtatgcggagcagaaaagcctgctggtcgcg
ctgacccgcgcatcggagcaggtcacggcaagtgcggtgtacaacgacgatctgaccccg
tctgacttcctgtacggatacatgccggaacgattcaaccgcgaacggcatgcgtcggcc
gaagggcgggaatatagccaggtcggtgaagccggacggctccaaggtctggacgccgat
cctcgcggcctggtcgccgccgcccgcgtggcgctcgccgtatacccacgaggttccaag
gaatctcaagatgctgtggatgcgctgcgactgctggcaagcaatggtgtcgaagccgct
gacatcacgcgttggccgttcctcgacgaggtcgaggatgcgtcttccggctcccgcacg
gtgggatcgcgggcggcggctccggaaccggacaaggccgcggagggaaccggccaatca
tcggtgccgcggatcgcaacattgtcgccatccgccgtggacagcatctggggatgtccc
gtctgttggatgatggaaaaccggttcactggtccgcgcgccggcagtgtggcgacctcg
ttcggctcgctgatccacgccgtcgccgaaaccgccagcaacgagggcctggacgcggcg
gactggcgcgatgacctgccgattccggaacgcgtcagcacggtgcgggaccgtatgatc
gccatctatgaggagctgcgcgacgatccgacggccaacaccaacccggccgatcaatac
aacgcgacgcgcaaggataataccgcgcatgacgtactgggccacatcgccagctacttc
gtcatgtccaacaccgacgaatacccggtaaacaacgtcaagaacttccggatcggtata
ttggaaagcgcacaatgcgagcgttcgttcatcgcggtattcggcttggacgacattctt
gccgcctataacgcgatggacggcgtcgacccgatcggccgcgatgaactcgccgccatc
atgggatcgctggttggcgggtggcccgaagccatgaacgaccggctgaccgtgcgtctg
tccgggcgcatcgaccgtatggagaccagaatcatgcccgacgggaagcgtcacgttcgc
ctgatcgactacaagaccgggaaggtgccttcgaccaaggccatattcaacgatcttcag
ctggtctgctaccaactgggactcgcattcccggaaaacgggccgcgcggagccgaagcg
ctgcaagtcatgccggacatcgcgcaaagtggtctgttccatgtcgcacagaaggatgca
cccgcgacgtccggaaccagcaacgcgcaggagggaatgtaccagccggcgctgttcgcc
gatggcagtctgaacacgtcatcgttcatgccgcggaaccgctacaagaccctcgataag
ctttcggatgctcccgatttgattgaagagcctccgaccggtgtaagcgcagcggcatgg
cgacagttcctcggcatgcgcggcacgcaggccgtatggtcgctctccatgatcgcgaga
gtgttctacgccgccgcggcgagtcggtcgacccatatacaggcaaggccgaaaccggat
catctccagtattgccgcatgaaagcggcatgcccggcatgcgccggcgaaatcaacacc
gtcttcgaaacgaggcagtcatga
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