Bordetella bronchiseptica RB50: BB4153
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Entry
BB4153 CDS
T00141
Name
(GenBank) putative hydrolase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BB4153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbr03400
]
BB4153
Enzymes [BR:
bbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
BB4153
DNA repair and recombination proteins [BR:
bbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BB4153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF5725
Motif
Other DBs
NCBI-ProteinID:
CAE34517
UniProt:
A0A0H3LYS6
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All DBs
Position
complement(4414218..4414877)
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AA seq
219 aa
AA seq
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MLASVVPELAFLFPRIMDPRTDFADGLTRCGWLDHSVDYVAYHDHEWGRPQADDRALFEQ
LCLEGFQSGLSWRTILNKRAAFRRAFADFELERVAGFDERRVEALLQDAGIVRHRGKIEA
VINNARRALALRDREGSLAAFFWRYEAPPRGADAPFEVLARTAESEALSKALKKQGWSFV
GPTTVYAFMQSVGMVNDHHPRCHHHAACEQARYRFQRPD
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgctagcatcggtggttccggaacttgcctttctgtttccccgcatcatggaccctcgt
accgattttgccgacggcctgacccgctgcggctggctggatcattccgtcgattatgtg
gcctaccacgaccacgaatggggccggccgcaggccgacgatcgcgccctgttcgagcag
ctgtgcctggagggcttccagtccggcctgagctggcgcaccatcctgaacaagcgcgcg
gccttccggcgcgccttcgccgacttcgagctggagcgggtggcgggtttcgacgaacgc
cgggtcgaggcgctgttgcaggacgccggcatcgtgcgccaccggggcaagatcgaggcg
gtgatcaacaatgcgcggcgcgccctggccctgcgcgaccgggaaggttcgctggcggca
ttcttctggcgctacgaggcgccgccgcgcggcgccgatgcgcctttcgaggtgctggcc
cgcaccgccgagtccgaggccctttccaaggccctcaagaagcagggttggtctttcgtg
gggcccaccaccgtctatgccttcatgcagtcggtcggcatggtcaacgaccatcacccc
cggtgccatcatcatgccgcctgcgagcaggcgcgttatcgattccagcgccccgattga
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