Bifidobacterium breve JCM 7019: B7019_1065
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Entry
B7019_1065 CDS
T03121
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7019_1065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrc03400
]
B7019_1065
DNA repair and recombination proteins [BR:
bbrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7019_1065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
DUF1995
UPF0758_N
IMS_HHH
DUF4124
Motif
Other DBs
NCBI-ProteinID:
AHJ19341
UniProt:
W6EX40
LinkDB
All DBs
Position
1220032..1222443
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AA seq
803 aa
AA seq
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MTNDIERHSPDEWRKTAAALMPESSSAGAEESAAAAKVNANGAPLLGDSRDLFRPKTSDI
PAKPGVYKWRDGEGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVAT
ELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGERVPRVWVTRSRKRRDTRYFGPY
AKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLLASIGKCSAPCVNQIEADEHRR
LCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARLRDQIQMLETVVQQNAVVFDQ
DVDADVFGFASDELEASVHAFYVRAGSIRGERNWSVERVEDIADADLMADLIVQVYSDAA
GDNHPQSTSSSAPVSGGENEAVPSLAGASTRSATGGAATISTSREAIGSTQTVTATDAIA
RAQATRERNTRQETTGRADLLAPIAPVPREIIVPIEPSRRAELESWLTDQRGGAVTIRVA
SRGDKKQLMDRANENASQALQRSKMSRISDMGARTQAMNDVAKALGLSQAPLRIECYDIS
NTVGGAFQVASMVVFEDAIAKKSEYRRFSIRGKDGQGAVDDLSALYETLTRRFKHGNIAG
DSGESIDAEQRAAKAEQQQEQSVSDANGTSSTTPAAITDASSFADSSVVQQNTNRHHFAY
KPNLVVVDGGKPQVMAAAKALEDCGVDDVAVCGLAKRLEEVWVPDDDYPIILKRQSEGMY
LLQRVRDESHRFAITYHRQQRRKGALRSALDEIPGIGESYQKRLLNHFGSVKAMRAASVE
DFEQVKGVGHAKAEALYAALHDE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgatatcgagcggcatagtccggacgagtggcgcaagactgcggcggcgttg
atgccggaaagctctagtgcaggagccgaagaaagcgcagctgcggcgaaggtgaatgcg
aatggggcgcctttgctgggggattctcgtgatctgtttcgacctaagacttcggacatt
ccggccaagcctggtgtgtataagtggcgcgatggggaagggcgcgtcatttatgtaggc
aaggccaagaacctgcgcaataggcttaccaattatttccagccactgtatctgctgcat
ccgcgtacacagaccatggtgcttacggcacgcagtctggagtggacggttgttgccact
gagttggaatcgttgacgcttgagtacacgtggatcaaggagttcgatccgcggttcaac
gtgcagttccgcgacgacaagacctatccgtatctggcggtcagcacgggggagcgggtt
ccccgcgtgtgggtcacgcggtcgcgcaaacgccgcgatactcgttacttcggcccatac
gccaaggtgtgggagctgaggcacagcctcgatcggctgctgcgcacctttccggtacgt
acctgcaccacgaatgtatttcataaagcccagctgaccggacggccctgcctgctggcc
tctatcggcaaatgctcggctccctgcgtgaatcagattgaagcggacgaacatcgacgg
ctgtgcgaacaacttgttggcgtcatgaccggacgccttggacgaccgtatatcgcgcag
ttgacccgcgacatgaaagaggccagcgccgagcttgaattcgagaaggcggcccgtctg
cgcgaccagattcagatgctggagaccgtggtgcagcagaacgccgtcgtcttcgatcag
gacgtggacgccgacgtgtttggctttgccagcgacgaattggaagcctccgtgcacgcc
ttctatgtgcgtgccggctcgattcgcggcgaacgcaactggagcgtcgaacgggtcgaa
gacatcgccgacgccgaccttatggctgacctcatcgtgcaggtctattcggacgcggct
ggcgacaaccacccccagtcgacttcgtcgtcagcccccgtcagcgggggcgaaaacgaa
gccgtgccctcactggcgggggctagcacgcgaagcgcgactggtggcgctgcgaccatc
tccaccagtcgcgaggccatcggctctacgcagaccgtcaccgccacggacgcaatcgcc
cgagcccaagccactcgcgagcgcaatacccgtcaggaaaccactgggcgtgctgatctg
ctggcacccattgcgccggtgccgcgcgaaatcatcgtgccgatcgaaccgtcccgtcgt
gcggaactcgaaagctggctgaccgaccagcgcgggggagcggtgaccattcgtgtggcc
tcccgaggcgacaagaagcagctcatggatcgcgccaacgagaacgccagccaggcgttg
cagcgcagcaagatgagccgtatttcggatatgggcgcacgcacccaagccatgaacgat
gtggctaaggcactggggctcagccaggcgccgttgcgcatcgaatgctacgacatttcg
aacaccgtgggtggcgccttccaggtggcttccatggtggtgttcgaggacgccatcgct
aagaaatccgaataccgtcgtttttccattcgcggcaaggacgggcaaggggcagtggac
gatctctccgcgctctacgagacgctgacgcgacgtttcaagcatggcaatatcgccggg
gattccggcgagagcatcgacgcggagcagcgcgcggccaaggctgagcaacagcaggaa
cagtccgtatccgatgcaaatggcaccagcagtacgacgccggcagcaattaccgatgcc
tcatcatttgccgattcgtctgtggtccagcagaacacgaatcgtcatcactttgcatac
aagccgaatctcgtggtggtcgatggcggcaaaccacaggtcatggccgcggccaaggct
ctcgaggattgcggcgtggatgatgtggccgtctgtggcttggccaaacgcctcgaagag
gtatgggtgccggatgatgactatccgatcatcctcaaacgccagtccgaaggcatgtac
ctgctgcagcgcgtacgtgacgaatcgcatcgattcgcgatcacctaccatcgccagcag
cgccgcaaaggcgcgctgcgcagtgcgctcgatgagattccgggtattggagagagctat
cagaaacggctgctcaatcatttcggttcggtcaaagccatgcgtgcggccagcgtcgag
gacttcgagcaggtcaaaggtgttggccacgccaaggccgaggcgttgtatgccgcgttg
catgacgagtag
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integrated database retrieval system
