Bifidobacterium breve S27: BS27_1797
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Entry
BS27_1797 CDS
T03123
Symbol
rmlC_rmlD
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
bbrs
Bifidobacterium breve S27
Pathway
bbrs00521
Streptomycin biosynthesis
bbrs00523
Polyketide sugar unit biosynthesis
bbrs00541
O-Antigen nucleotide sugar biosynthesis
bbrs01100
Metabolic pathways
bbrs01110
Biosynthesis of secondary metabolites
bbrs01250
Biosynthesis of nucleotide sugars
Module
bbrs_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbrs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BS27_1797 (rmlC_rmlD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BS27_1797 (rmlC_rmlD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BS27_1797 (rmlC_rmlD)
Enzymes [BR:
bbrs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
BS27_1797 (rmlC_rmlD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BS27_1797 (rmlC_rmlD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AHJ25557
LinkDB
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Position
complement(2129658..2131109)
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AA seq
483 aa
AA seq
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MAFEFEKELKVEKTNIPGLLVFDLPVHGDNRGWFKENWQRAKMMGLGLPDFGPVQNNISY
NATKGVTRGIHAEPWDKYISIAAGEIFGAWVDLRPGESFGQVYTTRLDPSKAIYVPRGVG
NSFQALQDGTVYTYLVNAHWSLEQKKTYTFVNLADPELNIQWPIPLEESERSEADLHHPM
LKDAKPMAPKRTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDIDEFDFSDPKAYEAYDWSL
YGTIINAGAYTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTA
KEHTETEAFAPLGVYGQTKAAGDIAVANAPEHYILRSSWVIGEGHNFVKTMMMLSNKVAD
PADKLEQVTVVDDQYGRLTFTKDMAEAIFHLLDSHAPYGTYNLTGSGAVKSWADIAAEVF
DLTNGNGSKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEAGYVPADWEETLKIYVQK
ELG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaattcgagaaggaactgaaggtcgagaagacgaacatcccgggccttctg
gtgttcgacctgccggtgcatggcgacaaccgtggctggttcaaggaaaactggcagcgc
gccaagatgatgggtctgggtctgccggacttcggcccggtgcagaacaacatcagctac
aacgccaccaagggcgtcacccgtggcattcacgcggagccgtgggacaagtacatcagc
atcgcggccggcgagatcttcggcgcatgggttgacctgcgcccgggcgagagcttcggc
caggtgtacacgacccgtttggatccgtccaaggcaatctacgtgcctcgcggcgtgggc
aacagcttccaggcactgcaggacggcacggtgtacacgtatctggtgaacgcgcactgg
tcgctcgaacagaagaaaacctacacgttcgtgaaccttgcggatccggaactgaacatc
cagtggccgattccgctggaggagtccgaacgcagcgaggccgatctgcaccatccgatg
ctcaaggacgccaagcccatggctcccaagcgcaccctggtgacgggctgcaacggccag
ctgggccacgcgattcgcgcctacgcggaagcgcatggtctggagggcttcgagtacacg
gacatcgacgagttcgacttctccgacccgaaggcatacgaggcatacgattggagcctg
tacggcacgatcatcaacgccggtgcctacacggccgtcgacaaggccgagaccgctgaa
ggccgtccgatcgcgtggaaggcgaatgcccagggtccggctctgctggccaaggtggcc
aaggaccaccacatcaccctcgtgcacgtgagttcggattatgtgttcgacggcaccgcc
aaggaacacacggagacggaggcgttcgccccgctcggtgtgtacggccagaccaaggct
gcgggcgacatcgccgtggccaacgcacccgagcattacatcctgcgttccagctgggtg
atcggcgaggggcacaacttcgtgaagaccatgatgatgctgtccaacaaggtcgccgac
ccggccgacaagctggaacaggtcaccgtggtggatgaccagtacggtcgcctgaccttc
accaaggacatggccgaggcgattttccacctgctcgacagccacgccccctacggcacc
tacaacttgaccgggtccggcgcagtgaagtcctgggctgatatcgcggccgaggtgttc
gacctgacgaacggcaacggcagcaaagtcaagcccatcagcaccgccgagtacttcgcg
aacgcgaccaacccggtatctccgcgtccggtcaactccgcactggatcttgccaagatc
ggtgaagccggatacgtgcccgccgactgggaagagaccctcaagatctacgtgcagaag
gaactcggctga
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