KEGG   Brettanomyces bruxellensis: BRETT_003066
Entry
BRETT_003066      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BRETT_003066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbrx03400]
    BRETT_003066
Enzymes [BR:bbrx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BRETT_003066
DNA repair and recombination proteins [BR:bbrx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     BRETT_003066
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 RNA_ligase DNA_ligase_A_C
Other DBs
NCBI-GeneID: 64574990
NCBI-ProteinID: XP_041139372
LinkDB
Position
9:2884396..2887326
AA seq 976 aa
MNNKEEYEYSDLASPVEKARKKKPINHGPLPSFRYIVNQLFIPVENVTRNRRLHLSVNKT
DVIFRFISNYRQTVGDDILPVARLYFPKWDRKRVYMMKEHKLGKIVCDYLKLHRNAEDFK
RIHNWKQLSYNHMKTSVPFSDLLVEIISRRRISRIIPDSELLNVNDVNIILDKLNSFAQD
KNISKADIFQNTINRMGDSELRYFFRIVLKDDPVGSESVFLNCWHPDARRLYDLTHDLKL
VFWGLDDPSSRLSTKQKQIRLMLPFTPQRCQRVRSEYSKIASYSFHDLPFLIEEKFDGER
MQVHIARDSNDHNKLIFKYFTRNAMDYTSIYGANSGNDVDFTGCISHLLKSSNFHENMKN
CILDGEMICYDPVLRIPLPYSCVKLSALHSLALGENRELDKEPHPMFMAFDCVYLNDTSL
EDYDLSQRKSALNYVLRKPVANLFTIADYEVARSGDEIGKAMKKAISMDSEGIVLKHIQS
KYVVGSISKEWIKVKPEYLEEFGENLDLVIVGKIPGAKTSYICALRDDSEERTVKEGGEH
NSNEKSCKFITLCKIANGFSIEDYRYIDERTKNKWKKMDEMPQTPKVIFGKDIPDFWIDP
IDSVVIEARARSIALQPKQTGYATSTTLYNAYCVRIRPDKDWKTASTLNEYDISSNRAKI
HSAQTIFNGKRKRRMHVVSKKSHLLDVLNKGYTTSNSSPGKVSTLFSDYVFSVKTDCIYH
QALMPISKLNMVIARYGGALARDPESVILNSSKKHLIIIAEKMTSEVKGLTDKYNIFKFK
WCEDCITTGMVVSPDNSHIFISDLALNQLCASNESTFSGNPIVALNKYTFWGVVNGLNSS
RLRIPAIMKKSHLTNQELYDLHKFLMFSGMTFMLIYDTKTSNRKSIITMAIRLNGGDTTT
KINCCSMIVILFDEEELVSLFKQKDHIIHKIRKVMEERGQLNTTKIPHMVKYNYIESCIK
ENTLVGTANYRVFLPS
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgaataataaagaagagtatgagtattctgatctagctagtcctgtggagaaggctaga
aaaaaaaagccaatcaaccatggacctcttccttcattcagatatattgtaaaccagcta
tttattccggttgagaatgtcactagaaacaggagattgcatttaagtgtgaataaaact
gatgtaatttttagatttatttccaattaccggcaaacagtgggagatgacattctcccg
gtggctagactatattttccaaaatgggatcgaaaacgtgtgtatatgatgaaggagcat
aagcttggaaagattgtttgcgattatctcaagcttcataggaatgccgaggactttaag
agaatccacaattggaaacagttatcttacaaccatatgaaaacatcagtgccattttca
gacctcttggtggaaataatatccaggaggcgaatttcaaggattatacctgacagtgaa
cttcttaacgtcaatgatgtaaacataatcttagataaactcaacagttttgcccaagat
aaaaatattagcaaagcagatatttttcagaataccatcaaccgtatgggagatagcgag
ttgcgttattttttcagaatagtactcaaagatgatccggtaggctctgaatctgtcttc
ctaaactgttggcacccagatgcaagacgattatacgatcttacacacgaccttaagtta
gtattttgggggttggatgacccatcgtctagactttcaaccaagcagaaacaaataagg
ttgatgcttccttttactcctcaacgatgccaaagagttaggagtgaatattctaagatt
gcttcctatagttttcacgacttacctttcttaatcgaagaaaagtttgacggagaaaga
atgcaagttcacatagcacgagatagtaatgaccataacaaattgatctttaaatatttc
actagaaacgccatggattatacatctatttatggagcaaattctggaaatgatgtcgat
tttactgggtgtatttcacacctacttaaatcctcgaattttcatgaaaatatgaagaac
tgcatcttagatggggaaatgatttgctatgatccagtattaagaatacctttaccatat
tcgtgtgtaaagctatccgctttgcattctctggcactgggtgaaaatagggaattagac
aaagaacctcatcctatgtttatggcttttgattgcgtatatttgaatgatacttctttg
gaagattatgatctttctcaaagaaaatctgcgcttaattatgttctacgaaagccagta
gcaaacttgtttacaattgcagattatgaagtagcaagaagcggggatgagattggaaag
gcaatgaaaaaggcgattagcatggattcagaaggtattgttttgaaacatatacagtca
aaatatgtcgttggtagtatatcaaaggaatggatcaaagtaaagccagaatatttggaa
gagttcggtgaaaacttagatttggtaattgttggaaaaatacctggggccaagacttca
tatatctgtgcattaagggatgattcagaagaacgaactgtcaaggaaggaggtgagcat
aattcaaatgaaaagagctgcaaattcattactctttgtaaaatagcgaatggcttctca
attgaagattatagatatattgatgagaggacaaaaaataaatggaagaagatggatgaa
atgccacaaacaccaaaagtgatttttggaaaggacatacccgatttctggattgatccc
attgattctgtggtgattgaggctagggctcgttcaatagcgttacaacctaagcaaacc
ggttatgccacatctacaacgttgtataacgcatattgcgtcaggatacgtcccgacaag
gattggaaaactgcaagcacattaaatgaatatgacatttcctctaatagggctaagata
cattctgctcaaacaatttttaatggcaaaagaaagcgaaggatgcacgtggtttccaag
aagagtcatttgctagatgtcttaaataaaggatatacaacgtcgaatagctctccaggt
aaagtctctactttattttctgattatgttttcagcgttaagaccgattgcatttatcac
caagcattaatgcctattagtaaacttaacatggtaattgctcgctatggaggagcacta
gcaagagaccctgaatcagttatccttaattcatctaaaaagcatctgatcatcatcgct
gaaaagatgacatctgaagttaaaggattgacggataagtataatattttcaaatttaag
tggtgtgaagactgcattacaacaggaatggtcgtgtcaccagataattcacatattttt
atatcagatctggcattaaatcagctttgtgcatcgaacgaaagtacgtttagtggaaat
ccaattgtggctttgaataaatatacattttggggtgtcgtcaatgggttgaattcaagc
agattaaggattcccgctataatgaagaaatcacaccttacaaatcaagagctgtatgat
cttcacaaatttcttatgttttctggcatgacattcatgttaatttatgatacaaagaca
tcaaatagaaaatctataattacaatggccatacgcctaaatggtggggatactactacg
aaaataaattgttgttctatgattgtgattttatttgacgaagaagaactggtatcactt
tttaagcaaaaggaccatattattcacaagattcgaaaggtgatggaggagagagggcag
ctaaataccacaaaaataccacacatggttaaatataattacattgaatcatgtattaaa
gagaatactctagtgggaactgcgaactacagggtttttcttccatcgtga

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