Brettanomyces bruxellensis: BRETT_003066
Help
Entry
BRETT_003066 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BRETT_003066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_003066
Enzymes [BR:
bbrx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BRETT_003066
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
BRETT_003066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
64574990
NCBI-ProteinID:
XP_041139372
LinkDB
All DBs
Position
9:2884396..2887326
Genome browser
AA seq
976 aa
AA seq
DB search
MNNKEEYEYSDLASPVEKARKKKPINHGPLPSFRYIVNQLFIPVENVTRNRRLHLSVNKT
DVIFRFISNYRQTVGDDILPVARLYFPKWDRKRVYMMKEHKLGKIVCDYLKLHRNAEDFK
RIHNWKQLSYNHMKTSVPFSDLLVEIISRRRISRIIPDSELLNVNDVNIILDKLNSFAQD
KNISKADIFQNTINRMGDSELRYFFRIVLKDDPVGSESVFLNCWHPDARRLYDLTHDLKL
VFWGLDDPSSRLSTKQKQIRLMLPFTPQRCQRVRSEYSKIASYSFHDLPFLIEEKFDGER
MQVHIARDSNDHNKLIFKYFTRNAMDYTSIYGANSGNDVDFTGCISHLLKSSNFHENMKN
CILDGEMICYDPVLRIPLPYSCVKLSALHSLALGENRELDKEPHPMFMAFDCVYLNDTSL
EDYDLSQRKSALNYVLRKPVANLFTIADYEVARSGDEIGKAMKKAISMDSEGIVLKHIQS
KYVVGSISKEWIKVKPEYLEEFGENLDLVIVGKIPGAKTSYICALRDDSEERTVKEGGEH
NSNEKSCKFITLCKIANGFSIEDYRYIDERTKNKWKKMDEMPQTPKVIFGKDIPDFWIDP
IDSVVIEARARSIALQPKQTGYATSTTLYNAYCVRIRPDKDWKTASTLNEYDISSNRAKI
HSAQTIFNGKRKRRMHVVSKKSHLLDVLNKGYTTSNSSPGKVSTLFSDYVFSVKTDCIYH
QALMPISKLNMVIARYGGALARDPESVILNSSKKHLIIIAEKMTSEVKGLTDKYNIFKFK
WCEDCITTGMVVSPDNSHIFISDLALNQLCASNESTFSGNPIVALNKYTFWGVVNGLNSS
RLRIPAIMKKSHLTNQELYDLHKFLMFSGMTFMLIYDTKTSNRKSIITMAIRLNGGDTTT
KINCCSMIVILFDEEELVSLFKQKDHIIHKIRKVMEERGQLNTTKIPHMVKYNYIESCIK
ENTLVGTANYRVFLPS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagaagagtatgagtattctgatctagctagtcctgtggagaaggctaga
aaaaaaaagccaatcaaccatggacctcttccttcattcagatatattgtaaaccagcta
tttattccggttgagaatgtcactagaaacaggagattgcatttaagtgtgaataaaact
gatgtaatttttagatttatttccaattaccggcaaacagtgggagatgacattctcccg
gtggctagactatattttccaaaatgggatcgaaaacgtgtgtatatgatgaaggagcat
aagcttggaaagattgtttgcgattatctcaagcttcataggaatgccgaggactttaag
agaatccacaattggaaacagttatcttacaaccatatgaaaacatcagtgccattttca
gacctcttggtggaaataatatccaggaggcgaatttcaaggattatacctgacagtgaa
cttcttaacgtcaatgatgtaaacataatcttagataaactcaacagttttgcccaagat
aaaaatattagcaaagcagatatttttcagaataccatcaaccgtatgggagatagcgag
ttgcgttattttttcagaatagtactcaaagatgatccggtaggctctgaatctgtcttc
ctaaactgttggcacccagatgcaagacgattatacgatcttacacacgaccttaagtta
gtattttgggggttggatgacccatcgtctagactttcaaccaagcagaaacaaataagg
ttgatgcttccttttactcctcaacgatgccaaagagttaggagtgaatattctaagatt
gcttcctatagttttcacgacttacctttcttaatcgaagaaaagtttgacggagaaaga
atgcaagttcacatagcacgagatagtaatgaccataacaaattgatctttaaatatttc
actagaaacgccatggattatacatctatttatggagcaaattctggaaatgatgtcgat
tttactgggtgtatttcacacctacttaaatcctcgaattttcatgaaaatatgaagaac
tgcatcttagatggggaaatgatttgctatgatccagtattaagaatacctttaccatat
tcgtgtgtaaagctatccgctttgcattctctggcactgggtgaaaatagggaattagac
aaagaacctcatcctatgtttatggcttttgattgcgtatatttgaatgatacttctttg
gaagattatgatctttctcaaagaaaatctgcgcttaattatgttctacgaaagccagta
gcaaacttgtttacaattgcagattatgaagtagcaagaagcggggatgagattggaaag
gcaatgaaaaaggcgattagcatggattcagaaggtattgttttgaaacatatacagtca
aaatatgtcgttggtagtatatcaaaggaatggatcaaagtaaagccagaatatttggaa
gagttcggtgaaaacttagatttggtaattgttggaaaaatacctggggccaagacttca
tatatctgtgcattaagggatgattcagaagaacgaactgtcaaggaaggaggtgagcat
aattcaaatgaaaagagctgcaaattcattactctttgtaaaatagcgaatggcttctca
attgaagattatagatatattgatgagaggacaaaaaataaatggaagaagatggatgaa
atgccacaaacaccaaaagtgatttttggaaaggacatacccgatttctggattgatccc
attgattctgtggtgattgaggctagggctcgttcaatagcgttacaacctaagcaaacc
ggttatgccacatctacaacgttgtataacgcatattgcgtcaggatacgtcccgacaag
gattggaaaactgcaagcacattaaatgaatatgacatttcctctaatagggctaagata
cattctgctcaaacaatttttaatggcaaaagaaagcgaaggatgcacgtggtttccaag
aagagtcatttgctagatgtcttaaataaaggatatacaacgtcgaatagctctccaggt
aaagtctctactttattttctgattatgttttcagcgttaagaccgattgcatttatcac
caagcattaatgcctattagtaaacttaacatggtaattgctcgctatggaggagcacta
gcaagagaccctgaatcagttatccttaattcatctaaaaagcatctgatcatcatcgct
gaaaagatgacatctgaagttaaaggattgacggataagtataatattttcaaatttaag
tggtgtgaagactgcattacaacaggaatggtcgtgtcaccagataattcacatattttt
atatcagatctggcattaaatcagctttgtgcatcgaacgaaagtacgtttagtggaaat
ccaattgtggctttgaataaatatacattttggggtgtcgtcaatgggttgaattcaagc
agattaaggattcccgctataatgaagaaatcacaccttacaaatcaagagctgtatgat
cttcacaaatttcttatgttttctggcatgacattcatgttaatttatgatacaaagaca
tcaaatagaaaatctataattacaatggccatacgcctaaatggtggggatactactacg
aaaataaattgttgttctatgattgtgattttatttgacgaagaagaactggtatcactt
tttaagcaaaaggaccatattattcacaagattcgaaaggtgatggaggagagagggcag
ctaaataccacaaaaataccacacatggttaaatataattacattgaatcatgtattaaa
gagaatactctagtgggaactgcgaactacagggtttttcttccatcgtga
DBGET
integrated database retrieval system