Brettanomyces bruxellensis: BRETT_003717
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Entry
BRETT_003717 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_003717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003717
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BRETT_003717
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
eIF2A
NBCH_WD40
WDR54
VID27
Equine_IAV_S2
Motif
Other DBs
NCBI-GeneID:
64575640
NCBI-ProteinID:
XP_041136061
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Position
6:complement(617989..619419)
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AA seq
476 aa
AA seq
DB search
MNTQGGKQGMTPEEQEKKIQHRRTIDYFTPMGKMMIRKNVYNRRKTRQPLGHIRPEMSYL
TYLLPPFKEQPAIYDVETKFVHVSTNKARHAIHAIKWTPDAKRVLVSSYSGEFTLWNGMT
FNFESIMQAHDSAIFALQYSHDGDWLISGDQEGTIKYWQPNFNNVNILPKSHDNAIQGLA
FSPNSSKFVSCSDDQMLKIWNFSTAQQERVLKGHHWDVKCCDWHPSLGIVVSGSKDNLVK
FWDPRDATCITTMHDFKHTVTKAQFQQIGNQRLMAASSRDHSTRVFDLRTMKPLLSIRSF
NDTDMTAMSWHPVHSSILSIGGYDGSLSTYDLGKAIDPQIVTDDSSISTDAQPNTISPLN
FKEFHVKSITEPLSRIPYAHDKAIYTIEYHPLGHLLCTAGADKSLRFWCRGRPNDPLAFK
DTAYTGESWAEKQQHFMQRGYKQEEEGEEMQEEQETQTAAPSEPAFPGFSIPGLSG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaaggagggaaacaggggatgacacctgaggagcaggaaaagaaaatacaa
cacagaagaactattgactattttacaccgatgggaaagatgatgattcgtaaaaatgtg
tataataggagaaaaacgaggcaaccgttgggacatataagacctgagatgtcatatctt
acatacctacttccaccattcaaagaacaacctgctatatatgatgttgagacaaaattt
gttcacgtgtcgactaataaggcaaggcatgctatacatgctattaaatggacaccagat
gcaaagcgagttttggtttcttcctactctggagagttcacactttggaatggcatgacg
ttcaattttgagtctattatgcaggcccatgactcggcgatctttgctttacaatatagt
catgatggtgattggttgatcagtggtgatcaagagggtacaattaaatattggcagccg
aacttcaataacgtgaatatattgcccaaatcgcacgataatgcaattcagggcttggca
ttctcaccaaacagctccaagtttgtcagttgttctgatgatcagatgcttaagatatgg
aactttagtaccgcacagcaagaacgtgtattaaaaggtcatcactgggatgttaagtgc
tgtgattggcatccaagtcttggaatagttgttagtggctcaaaggataacttggtcaaa
ttttgggatccacgtgatgccacctgtattaccactatgcatgattttaagcacacagtt
acaaaagcccagttccaacagattggtaaccagagactcatggctgcctcatcacgtgat
cattctacccgtgtgttcgatcttcgcacaatgaaaccattattatcaatacgatctttc
aatgatacggacatgactgcaatgtcatggcacccagttcattcgtccattctttcaatc
ggcggatacgatggttctttatctacatatgatcttggcaaggcaattgatccacagatt
gttactgatgatagttctataagcacagatgcccaacccaatacaatctcgccactcaac
tttaaagaatttcatgtgaaaagtattaccgagccgttgagccggataccgtatgcacac
gataaagcaatatatacgattgagtatcatcctcttggtcatttgctgtgtactgctgga
gcggataaatcgcttaggttttggtgtaggggaagaccaaacgatccacttgctttcaaa
gatactgcatacactggagaaagctgggccgaaaaacagcaacatttcatgcagagagga
tacaaacaggaagaagaaggagaagaaatgcaagaagaacaggaaacacagactgcagct
ccttcagagccagcatttccgggtttcagtatacctggcttatctggttaa
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