Brettanomyces bruxellensis: BRETT_005036
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Entry
BRETT_005036 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03022
Basal transcription factors
bbrx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRETT_005036
09124 Replication and repair
03420 Nucleotide excision repair
BRETT_005036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_005036
03400 DNA repair and recombination proteins [BR:
bbrx03400
]
BRETT_005036
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BRETT_005036
DNA repair and recombination proteins [BR:
bbrx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BRETT_005036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
FGF-BP1
Motif
Other DBs
NCBI-GeneID:
64576959
NCBI-ProteinID:
XP_041136873
LinkDB
All DBs
Position
7:complement(1292871..1294685)
Genome browser
AA seq
604 aa
AA seq
DB search
MQSPLTQPSSSDLFKSSINEYLDNLPETVHAQLYKSPETCLAVFRLLPALAKFYIMTLLF
QETAIPFLDLNRWIRHKKASGTTHRRNPSKIYQNESIKRLKALNLLKEIRKKLKHPKTGK
IAVIVFVQLNPIFRQSFRDALTGFRAGRQLDPNEKITETIEESEAKESGRKGLKSSKDNK
STESTQKNLNALFSDDNAKITVEFLDSYCLSKWENILHFMVGSEIAEYPSIGVLTLLRYS
GLMELPSDRQRRENSSSGADADEDFVVDDHYIDGKLTPPSGEELKSLLITKSGFQFLLQT
INSQIWTLLLQYLKMSEKLMMNPVDVLNFIFMLGSLELGEGYPIGMLSDTQLIMLEDLID
YGLLYYPRDAASGGKGKIFYPTRLATSLTSEQTNFKTASAALNDQIANPATEADQTRVEG
SVIIETNFKIYCYTSSPLQIAILNLFVHLKTRFANMVTGIVTRESIRRALINGITADQII
NYLETHAHPGMVKKAEEKYAKKLEFENSIGNTYAADQLKFEILPPTVVDQIKLWQLELDR
IEATNGYLYKDFANDFEFEKLMDYGEEIGVILWKDKSHRRFFVTTEGNTQLIDYAKRILR
KKGE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcccctctgacccaaccctcctcctcagacctcttcaagtcaagcatcaacgag
tacttggacaatctccccgaaactgtccatgcacaactctacaaatcgccagaaacatgt
ttggcagtattcaggttgctccctgcactcgccaagttctacatcatgacccttctattc
caggagacggcaatcccgtttttggacctcaataggtggatccggcacaaaaaggcttca
ggcactacacacaggcgaaacccaagcaagatataccagaacgagtccatcaagcggctc
aaagcactcaatctcctcaaggagatcaggaagaagctcaagcacccgaaaacaggcaag
atcgccgtcatagtgtttgtgcagttgaacccgatcttcaggcagagtttcagggatgca
ctcactggatttcgggccggcaggcagttggatccaaatgagaagatcacggagacgatc
gaggagtctgaggcgaaagagagcggaaggaagggcctgaaaagctcaaaagacaacaaa
agcaccgaaagcacgcagaaaaacctcaatgcactgttcagcgacgacaacgcgaagatc
acagtggagttcctggactcgtactgcttgtcgaagtgggagaacatcttgcacttcatg
gttggctcggagatcgccgagtaccccagcataggcgtgctgacgttgcttcggtacagc
gggttgatggagctgccgtccgaccgccagaggagagaaaacagctcttccggggcagat
gcagacgaggattttgtagtcgacgatcattacatagacgggaagctgactccaccttca
ggggaggagctcaagtctcttctgatcacgaaaagcgggttccagtttcttctccagacc
atcaactcgcaaatctggaccctcctcctccagtacttgaagatgtccgagaagctcatg
atgaacccggtggacgttctcaacttcatcttcatgttgggatcgctcgagctcggagag
ggttacccgatcgggatgctaagcgacacccagctcatcatgcttgaggatctgatcgat
tacgggcttctatactacccgcgggatgctgcttccggcggaaagggcaagatattctac
ccgacgcgtctagccacgtcgttgacctccgagcagaccaacttcaagactgcaagtgcc
gctttaaacgatcagattgccaacccggcgaccgaggccgaccaaaccagggttgaaggg
tctgtgatcatcgagacaaacttcaaaatatactgctacacgtcctcgccgctccagatc
gccatcttgaacttgttcgtgcacctgaagacccgttttgccaacatggtcaccggcatt
gtcacccgggagtccattcgcagggccctgatcaatggaatcaccgccgatcagatcatc
aactacttggagacccacgcacacccggggatggtgaaaaaagcagaggaaaaatacgcc
aagaagcttgaattcgagaattccatcggcaacacctacgctgccgaccagctgaagttc
gaaatcctccctcccacagtcgtggaccagatcaagctctggcagttggagctagaccga
attgaggctaccaacgggtacttgtacaaggattttgccaatgacttcgagtttgagaag
ctcatggactacggtgaggagataggtgttattttgtggaaggacaagtcccacaggcgg
ttttttgtcactaccgagggaaacacgcagttgattgattacgcgaagcggatattgagg
aagaagggagaatga
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