Bradyrhizobium sp. BTAi1: BBta_4316
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Entry
BBta_4316 CDS
T00528
Name
(GenBank) Putative Sensor histidine kinase with a GAF domain and multiple HAMP and Response regulator receiver domains
Organism
bbt
Bradyrhizobium sp. BTAi1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
Response_reg
HAMP_2
adh_short
HATPase_c
adh_short_C2
HisKA
GAF_2
Epimerase
GAF
GatB_Yqey
FBF1
OmpH
RNase_Y_N
ATG14
IFT57
DUF3584
YscO-like
FUT8_N_cat
HrpB7
KR
Motif
Other DBs
NCBI-ProteinID:
ABQ36363
RhizoBase:
BBta_4316
UniProt:
A5EJL9
LinkDB
All DBs
Position
4518985..4524072
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AA seq
1695 aa
AA seq
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MNGAVIVITGAQGALGRSVADLALARGAHVAGIDHAQAEIPASDDRIELGGVDLSDPEQA
KVAIDSVAAHFGTLDALINIAGAFAFENAADGDDTVWDKMHARNLMTALHASRAAIPHLV
RSSTGRIVNIGAMGALQAGAGMGPYAASKSGVHRLTEALASEWKGKDLTDSVNSMASNLT
GQVRNIAEVATAVAKGDLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGT
DGKLGGQAEVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKITVDVRG
EILSLKETLNTMVDQLNRFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDSVNSMA
GNLTAQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFASEVTRVAR
EVGTEGKLGGQAEVPEVAGTWKDLTDSVNFMASNLTAQVRNIAEVATAIAGGDLSKKITV
DVRGEILLLKDTLNTMVEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKDLTDNV
NLLAANLTTQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVT
RVAREVGTEGKLGGQAQVPGVAGTWKDLTDTVNFMAANLTEQVRGIVKVVTAVANGDLKQ
NLTVKSKGEVAALADTINNMTETLATFADQVSSVAREVGVEGRLGGQANVPGAAGTWKDL
TGNVNLLAANLTSQVRAIAEVATAVTKGDLTRSIQVDARGEVAELKDNINTMITNLRLTT
DLNTEQDWLKTNLARFTNMLQGQRDLTTVGRLLLSELTPLVNAHRGVIYQVENEYTPQLR
LLASYADDGVYPHRQSVQFGEGLIGQCAIDKRQRLISEIPSDVIPVGSALLRAVPKNLVV
LPVLFENQVKAVIELASLSPFTTSQMTFLEQLTDSIGIVLNSIEATMQTEGLLKQSQQLA
AELQAQQRELQQTNEQLEQKAQQLAERNVEVERKNQEIEQARRALEEKATELALTSKYKS
EFLANMSHELRTPLNSILILGQQLTENPDGNLTMKQVEFARTIHGAGTDLLNLISDILDL
SKIESGTVTVDAEEILTANLLETVGRPFRHEAENRLLSFNIDVDPNLARSIVTDSKRLQQ
VLKNLLSNAFKFTADGGVRLKVSAALGGWSAEHPVLNTAPAVIAFEVSDTGIGIPQDKQK
LIFEAFQQADAGTSRKYGGTGLGLAISRELANLLGGEIHLKSAPGKGSTFTLYLPLKYSG
PAVAPRISPTPAASYTPPLLPAQQPPASDRVAEQLADDRLELAPGDTTLLIVEDDPHYAR
VLIDLARDKGFKILVATRGAEALDLAKQYQPAAISLDVFLPDMLGWTVLSQLKHNPLTRH
IPVQIITLDEDRQHALARGAFSFVNKPTTTEGVSAALSQIKEYAQPRRKRLLIVEDNAAE
QLSIRQLLDHDDIEILAADTGAGALEALRGTPCDCVVLDLRLPDMSGFDVLDQLRSDETL
SGIPVVVFTGRELSAEEDAELHTMARSIVVKGVESPERLLDETALFLHRVITELPIEKQR
MLEKLNSSDEDLVGKTVLLVDDDARNIFALSSVLERRGMKVLTATTGAEAIDLVQSTPAI
SIVLMDIMMPQMDGYQTIGVIRQNPAFARLPIIALTAKAMKGDREKCLEAGASDYLAKPV
NTEQLLLAIRMWLHR
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcagtgattgtcattacgggcgcgcagggggcgctagggcggagcgttgcc
gatctcgctctggcgcggggcgcgcacgtggccggaatcgatcatgcccaggcagaaatc
ccagccagcgacgaccgcatcgaactcggaggggtcgacttgtccgatcccgaacaggcg
aaggtcgcaatcgactcggtcgcggcccatttcggcactctggatgccctgatcaacatc
gccggcgcatttgcgttcgagaatgcagccgatggcgacgatacggtctgggacaagatg
catgcgcgcaatctcatgacggcgctgcatgcctcgcgcgctgcaatcccgcatctggtg
cgttccagcaccggccgcatcgtcaatatcggcgcgatgggcgcgctgcaggccggcgcc
ggcatgggcccctacgctgcctccaaatccggtgtgcatcgcctgaccgaggcgctcgca
tcggagtggaaaggcaaggacctgaccgacagcgtcaactcgatggcctccaacctgacc
ggccaggttcgtaacatcgccgaagtggccaccgccgtcgccaagggcgatctctccaag
aaaatcaccgtcaatgtgtcaggcgagattctccagctgaaggagacgctgaacacgatg
gtcgatcagctcaacgccttcgccggcgaggtcacgcgcgtcgcccgtgaggtcggcacc
gacggcaagctcggcggccaggccgaggtgccgggcgtcgccggcacctggaaggatctc
accgacagcgtcaactcgatggccggcaatctcaccgcccaggtccgcaacatcgccgag
gtggccaccgccatcgccggtggcgacctgtcgcgcaagatcacggtcgacgtccgcggc
gagatcctgagcctgaaggaaacgctgaacacgatggtggatcagctcaaccgctttgcc
ggcgaggtgacgcgcgtcgcccgcgaggtcggcaccgagggccggctcggcggccaggcc
aacgtgcccggcgtcgccggcacctggaaggatctcaccgacagcgtcaactcgatggcc
ggcaatctcaccgcccaggtccgcaacatcgccgaggttaccacagccgtggcgcgcggc
gacctgtcacgcaagatcactgtcgacgtgaagggcgagattctcgagctgaagaacacc
atcaacaccatggtcgaccagctcaatgccttcgcatccgaggtgacgcgcgtcgcccgc
gaggtcggcaccgaaggcaagctcggcggccaggccgaggtgcctgaagtcgccggcacc
tggaaggacctcaccgacagcgtcaacttcatggcttccaacctgacggcgcaggtccgc
aacatcgccgaggtcgcgaccgccatcgccggcggcgacctgtcgaagaagatcaccgtc
gacgtgcgcggcgagatcctgctgctcaaggacaccttgaacacgatggtcgagcagttg
cgctctttcgccgccgaggtgacgcgcgtggcgcgcgaggtcggcaccgagggccggctc
ggcggccaggccgtggtgcccggcgtcggcggcacctggaaggatttgaccgacaacgtc
aacctgctcgcggccaatctcaccacgcaggttcgcaacatcgccgaggtcaccacggcg
gttgcgcgcggcgacctgtcgcgcaagatcaccgtcgacgtgaagggcgagattctcgag
ctgaagaacaccatcaacacgatggtcgatcagctcaacgccttcgccggcgaggtgaca
cgcgtggcccgcgaggtcggcaccgaaggcaagctcggcggccaggcccaggtgccaggt
gtcgccggaacctggaaggacctcaccgacaccgtgaacttcatggcggccaacctgacc
gagcaggtccgcggcatcgtcaaggtggtcacggccgtggccaatggcgatctcaagcag
aacctgaccgtaaagtccaagggtgaggtcgcagccctcgccgacaccatcaataacatg
accgagacgctcgcgacctttgccgatcaggtcagcagcgtggcccgcgaggtcggcgtc
gaagggcggctcggcggccaggccaacgtgcctggcgcggccggcacctggaaggatctg
accggcaacgtcaacctgctcgcggccaacctgacctcgcaggtccgcgccatcgccgaa
gtcgcgactgccgtgaccaagggcgacctcacgcggagcattcaggtcgatgcgcgcggc
gaggtggccgagctcaaagacaacatcaacaccatgatcaccaacctgcggctcacgacc
gacctcaacaccgagcaggactggctgaagacgaacctcgcccgcttcaccaacatgctg
caggggcagcgcgacctgacaaccgtcggccgcctgctgctcagtgagttgacgccgctc
gtgaatgcgcatcgcggcgtgatctaccaggtcgagaacgagtatacgccgcagcttcgc
ctgctcgcctcctacgccgatgacggcgtgtatccccatcgccagtcggtccagttcggc
gaagggctgatcggccagtgcgccatcgacaagcggcaacggctgatctccgagattcca
tccgacgtcattccggtcggctctgctttgcttcgcgccgtccctaagaacctcgtcgtg
ctccctgtgctattcgagaaccaggtcaaggcggtgatcgagctggcgtcgctcagcccg
ttcacgacgtcgcagatgacgtttctggagcagctcaccgattccatcggcatcgtgctc
aactcgatcgaagccaccatgcagaccgagggcctgctcaaacagtcccagcaattggcg
gcagagctgcaggcgcagcagcgcgagctgcaacagaccaacgagcagctcgaacagaaa
gcccagcagctggccgagcgcaacgtcgaggtggaacgcaagaaccaggagatcgagcag
gcccggcgcgcgctcgaggaaaaggcaacggagcttgccctcacctccaagtacaagtcc
gagttcctggccaacatgtcgcacgagctgcgcacgccgctcaacagcatcctgatcctg
ggccagcagctgaccgaaaaccccgacggcaacctcaccatgaagcaggtcgaattcgcc
cgcaccattcatggcgcaggcaccgaccttctcaacctgatcagcgacattctcgatctg
tccaagatcgagtccggcacggtgaccgtcgacgccgaggagatcctcaccgccaacctc
ctggagacggtcggccgtccgttccggcacgaggcggaaaaccgcctgctgtccttcaat
atcgatgtcgatccgaaccttgcgcgaagcatcgtcacggattccaagcggctgcagcag
gtgctgaagaacctgctttcgaatgccttcaaattcactgcggacggcggcgtccggctg
aaagtctcggctgcacttggcgggtggagcgctgagcatccggtcctcaacaccgcgccg
gccgtcatcgcctttgaagtctccgacaccggcatcggcattccccaggacaagcagaag
ctgatcttcgaggccttccagcaggccgacgccgggaccagccgcaaatatggcggcacc
gggctcgggctcgccatcagccgcgagctcgcgaacctgctgggcggtgaaattcatctg
aagagcgcccccggcaagggcagcacgttcacactttacctgccgctgaaatattccggt
ccggccgtcgctccgcgcatcagcccgacaccagctgcgtcctacactccgccgctgctg
ccggctcagcagcctccggcctccgaccgcgtcgccgaacagctggccgacgacaggctc
gagctcgcccccggcgacacgacccttctgatcgtcgaggacgacccgcattatgcccgc
gtgctgatcgatctcgcgcgcgacaagggcttcaagatcctggtcgccacccgcggcgcg
gaagccctcgacctcgccaagcagtaccagcccgcagccatttccctggatgtgttcctg
ccggacatgctgggctggacggttctgagccagctcaagcacaatcctctgacccggcac
attccggtgcagatcatcacattggacgaggaccgtcagcatgcgctggcgcgtggagcg
ttctccttcgtcaacaagccgacaaccaccgagggcgtgagtgccgcgctcagccagatc
aaggagtacgcgcagccgcgccgcaagcgcctgttgatcgtcgaggacaatgcggccgaa
cagctcagcatccgtcagctgcttgatcatgacgacatcgagatcctcgcagcggacacc
ggtgcgggcgcgctggaggcgctgcgcggcacgccctgcgattgcgtcgttctcgatctc
cgcctcccggacatgagcggattcgacgtgctcgatcagttgcgttcggacgaaaccctg
tcaggcattcctgtcgtcgtcttcaccggccgtgaattgtccgccgaggaggacgcggaa
ctacacacgatggcccgcagcatcgtcgtgaagggcgtggagtcgccggagcggctgctc
gacgagacagccttgttccttcaccgcgtcatcacggaactgccgatagaaaagcagcga
atgctcgaaaagctgaacagttccgacgaagacctcgtcggaaaaacggttctgctggtc
gacgacgacgcccgcaacatcttcgcgctgtcgagcgtgctggagcgccgcggcatgaag
gtgctgaccgcgacgaccggcgccgaagcgatcgacttggtgcagagcacgcctgcgatc
tcgatcgtgctgatggacatcatgatgccgcagatggatggttaccagacgatcggcgtc
atccggcagaaccctgcctttgcccggctcccgatcatcgcgctgaccgcgaaggccatg
aagggagatcgcgagaagtgcctcgaagccggcgcttccgattatctcgcaaaacccgtc
aacaccgagcagttgcttcttgcgatccgcatgtggctgcaccgctga
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