Bubalus bubalis (water buffalo): 102390399
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Entry
102390399 CDS
T05912
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X2
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102390399 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bbub04054
]
102390399 (DHX58)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102390399 (DHX58)
Pattern recognition receptors [BR:
bbub04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102390399 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
ResIII
DEAD
RIG-I_C-RD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
102390399
NCBI-ProteinID:
XP_044794888
EnsemblRapid:
ENSBBUG00015001311
LinkDB
All DBs
Position
3:20825293..20835789
Genome browser
AA seq
661 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
TQHCEEFSRMLERRWTITTLSGDMGPRAGFGHVARRHDLLICTAELLQKALVSPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNIILSRYLELKLQRTRPLPQVLGLTASPGTGGASTLEG
AIDHVLQLCANLDTWHIMSPKDHCPQLQEHSHQPCKQYDLCHRRTQDPFGDMLKKLMDQI
HDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYNDALLIHDTVRAV
DALDTLRDFYNRERTTKTQILHAERWLLALFDDHKDVLARLATSGPENPKLEALEAILQK
QFQSPDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQVLIGAGNNSQKTQMIQMTQ
RDQQEVIQKFRTGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQS
VYSFVAAQGSRELQRELTNEALEMLMERAVAAVQAMDQAEYQAKVSLVSAMPSVHSHLRS
GICSGQHWSNGQSRQPSERVGSASSWRSRIYYNISKQPVEINRSFKDWRPGGAISCRNCG
EAWGLQMIYKSVKLPVLKVGSMLLETPQGRVRAKKWSRVPFTVPDFDYVQYAEGLAGLSL
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcccgccctggaggggaagaatatc
atcatatggctgcccacgggctctgggaagaccagggcagctgcttatgtggccaagagg
catttagagaccgtggacggggccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccgcatgctggaaagacgctggaccatcacaaccctg
agcggggacatggggccacgagctggctttggccatgtggcccggaggcacgacctgctc
atctgcacggctgagctgctgcagaaggcactggtcagcccggaagaggaggagcatgtg
gagctcaatgcgttctcgctgctggtggtggatgagtgtcaccacacccacaaagacacc
gtctacaatatcatcctgagccgatacctggagcttaaactccagaggacccggccgctg
ccacaggtgctgggcctcaccgcctccccaggcactggcggtgcctccacgctcgagggg
gccattgaccacgtcctgcagctctgtgccaacctggacacatggcacatcatgtcaccc
aaggaccattgcccccagctgcaggagcacagccaccagccctgcaaacagtatgacctc
tgccacaggcgcacccaggacccctttggggacatgctgaagaagctcatggaccaaatc
cacgaccacttggagatgcccaagttgagacgggacttcgggacgcagacctatgagcag
caagtggtggaactgagccaggatgcggctgaggcggggctcctggagcagcgggtgtac
gcgcttcatctgcgtcggtacaacgacgcgctgctgatccacgacacggtccgcgcggtg
gatgccctcgacacgctgcgggatttctacaacagggagcgcaccactaagacccagatc
ctgcatgccgagcgctggctgctggcgctgtttgatgaccacaaggatgtgctggcccgc
ctggcaactagcggcccggagaacccgaaactggaggcactggaagcgatcctgcagaag
cagttccagagccctgacagcccccggggcatcattttcactcgaacccgccagagtgct
cactccctcctgctgtggctccagcagcagccgggcctgcagacagtggacatccggccc
caggtgttgattggggctgggaacaacagccagaagactcagatgatccagatgacacag
cgggaccagcaagaagtaatccagaagttccggactggtaccctgaacctcctggtggcc
acgagtgtggcagaggaggggctggacatcccccagtgcaatgtggtggtgcgctatggg
ctcctgaccaatgagatctccatggtccaggcaaggggccgggcccgtgccagccaaagc
gtatactcgtttgtggcagcccaaggcagtcgggagctgcagcgggagctgacgaatgag
gcgctggagatgctgatggaacgggcagtggctgctgtgcaggcgatggatcaggccgag
taccaggccaaggtctctctggtctcagccatgcccagtgtccactcccatctcagatcc
gggatctgcagcgggcagcattggtcaaacgggcagtccaggcagcccagcgagagagtc
ggcagcgcaagttcctggcggagcaggatctactacaacatctcaaagcagcctgtggag
atcaacagaagcttcaaggactggaggcccgggggtgccattagctgccggaactgcggg
gaggcctggggtctgcagatgatctacaagtcagtgaagctgccagtgctcaaagttggg
agtatgctgctggagacaccgcaagggcgagtccgggccaagaagtggtcccgcgtgccc
ttcactgtgcctgactttgactatgtgcaatatgctgagggcctggcgggcctctctctg
gactga
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