Bubalus bubalis (water buffalo): 102392986
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Entry
102392986 CDS
T05912
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X2
KO
K26273
protein strawberry notch
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102392986 (SBNO1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102392986 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102392986
NCBI-ProteinID:
XP_044786204
EnsemblRapid:
ENSBBUG00015024136
LinkDB
All DBs
Position
17:complement(20386470..20438691)
Genome browser
AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDVGLATPTPTPPIQQSVPLSALELGLETEAA
VPVKQEPETVPTPALLNVRQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLT
KFIQTTANTRPSVSAPAVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVAT
AATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLTAPSNSSSPRDSPCKENKTKKRKGEEITREAKKARK
IGGLTGSSSDDSGSESDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRK
DHKKNKDKKKRKSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSAPANSNTNSNSSL
ITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEVYADLKKKYKKVVSDD
AVVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINLLSTSDQSQQLAVQQKQLWQQ
RHPQSIASLSST
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgctttgagcgagagtggaattagtcca
aatgacctctttgatattgatggtggagatgtggggcttgcaactccaacacctacccct
cccatacagcagtcagtgccacttagtgcattagaactaggtttggagactgaagcagca
gttcctgttaaacaagaaccagagacggtacctactccggcacttttaaatgttaggcag
cctccatctactacaacatttgtgctgaatcaaataaatcagcttccaaccttgggatct
acaattgtaatgactaagacaccacctgtaaccacgaataggcaaaccatcactttaaca
aagttcattcagactactgcaaacacacgcccttcagtctcagcaccagcagtacgaaat
gccatgacttccgcaccttcaaaagaccaagttcaactgaaggacctgctaaaaaataat
agtctgaatgaactcatgaaactgaagccaccggctaatattgctcagccagttgcaaca
gcagctactgatgtaagcaatggcacagtaaagaaagagtcttctaataaagaagtagca
agaatatggataaatgacatgaaaatgaggagtttttccccaaccatgaaggtccctgtt
gtgaaagaggaagatgaaccagaagaagaagacgaagaagaaatgggtcatgcggaaacc
tatgcagagtatatgccaataaaattaaaaattggcctacgtcacccagatgccgtagtt
gagactagttctttatccagtgttactcctcctgatgtttggtacaagacatctatttct
gaagaaaccattgataatggctggttatcagcattacagcttgaagcaattacttatgca
gcccagcaacatgaaacgttcctacctaatggagatcgtgctggcttcttaataggcgat
ggtgctggtgtaggaaaaggaaggacaatagcaggaatcatctatgaaaattatttgtta
agtagaaaaagggctttatggttcagtgtttcaaatgatttaaagtatgatgccgaaaga
gatttgagggatattggagcaaaaaacattttggtccattcattgaataagtttaaatat
ggaaaaatttcttccaaacataatgggagtgtgaagaagggtgttatttttgctacctat
tcttcccttattggtgaaagtcagtctggcggtaaatataaaacgaggttaaaacaactt
ctgcattggtgcggtgatgacttcgatggagtgatagtttttgatgaatgtcataaagca
aaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagcagttttagaa
cttcagaacaaattgccaaaagctagagttgtctatgctagtgccactggtgcttctgaa
ccacgaaatatggcctatatgaaccgtcttggaatatggggtgagggaactccatttaga
gaattcagtgactttattcaggcagtagaacggagaggtgttggtgccatggaaatagtt
gctatggatatgaagcttagaggaatgtacattgctcgacagctgagctttactggagtg
accttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaagca
gtcaaactgtgggtcattgctcgagagcggtttcagcaagctgcagatctgattgatgct
gagcagagaatgaagaaatccatgtggggtcagttctggtctgctcaccagagatttttc
aaatacttgtgcatagcgtccaaagttaaaagagttgtgcaactagctcgagaagaaatc
aagaatggaaaatgtgttgtaattggtctgcagtctacgggagaagctagaacattagaa
gccttggaagagggcgggggagaattgaatgattttgtttcaactgccaaaggagtgtta
cagtcactcattgaaaaacactttcctgctccggacagaaaaaagctttatagtttgctg
ggaattgatttgacagctccaagtaacagcagttcaccaagagatagtccttgtaaggaa
aataaaacaaagaagcggaaaggtgaagaaataactcgagaagccaaaaaagcacgaaaa
ataggtggccttactggtagcagttctgatgatagtggaagtgaatctgatgcctctgat
aatgaagaaagtgactatgagagctctaaaaacatgagttctggagatgatgatgatttc
aacccattcagagatgagtctagtgaggatgatgaagatgatccctggttaatcagaaaa
gatcataagaaaaacaaagataaaaaaaaaaggaaaagtatagatccagattctattcaa
agtgccttattagcatcaggtcttggatcaaaacgacctagtttttcttctacaccagtt
atttcacctgctcctaacagtgcaccagctaacagtaacaccaacagcaacagtagcctt
ataacaagtcaggatgctgtggaaagggcccaacagatgaagaaagacctgcttgataaa
ctagaaaaattagctgaagacctccctcctaataccctggatgaacttattgatgaactt
ggtggccctgaaaatgttgctgagatgactggccgcaaggggagggttgtaagcaatgat
gatggaagcatatcttatgagtcaagatctgaacttgatgttcctgtggaaatactaaat
attacagaaaaacaaagatttatggatggagataagaatattgctatcatctcagaagct
gccagctcaggtatttcattacaagcggatagaagggctaaaaatcaaaggcgaagagtt
catatgactctggagttaccatggagtgctgatagagcaattcagcaatttggacgaact
catagatcaaatcaagttaccgctcctgaatatgtctttctgatttctgagttggcagga
gaacaaagatttgcatctattgttgctaaaagacttgagagtttgggcgcacttacacat
ggagacagaagagcaacagaatctagagatctgagccggttcaacttcgacaataagtat
ggaagaaatgctttagaaattgtcatgaaatccattgtaaacctagattctcctatggta
tcaccacctccagactatcctggagaattctttaaagatgttcgacaaggactgatagga
gttggtctaataaatgtagaagatcgttcgggaattcttactctagataaagattataac
aacataggaaaattcttaaacagaattttgggcatggaagtgcatcaacagaatgcactg
tttcagtattttgcagacacacttactgcagtcgttcaaaatgccaaaaaaaatggaaga
tatgatatgggaatcttagatcttggttctggggatgaaaaagtgaggaaaagtgatgtt
aagaagtttctgactccaggatattcaacatctggccatgtagaattatacacaataagt
gtggagaggggaatgtcctgggaggaagctaccaagatttgggctgagctgacaggacca
gatgatggcttttatttgtcattgcaaataagaaacaacaagaaaactgccatcttagtt
aaagaagtaaaccctaaaaagaagcttttcttagtttatagaccaaataccgggaaacaa
ctcaaattagaagtttatgctgatctaaaaaagaaatataagaaggtagtctcagacgat
gccgtggtccactggttagatcagtataattcatctgcagatacttgtactcatgcttat
tggcgtggcaactgcaaaaaagcaagcttgggattagtttgtgaaataggtcttcgttgc
cgcacatactatgtattatgtggctcagtactgagtgtctggacaaaagttgagggtgtt
cttgcgtctgtcagtggcacaaatgtgaaaatgcagatagttcgcctaagaacagaggat
ggacaacggattgtaggtttgatcattcctgcaaattgtgtgtctcctcttataaatctc
ctttcaacttcagaccagtctcaacagcttgcagtccagcagaaacagctctggcagcag
cgtcacccccagagcattgccagcttgagcagcacataa
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