Bubalus bubalis (water buffalo): 102395677
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Entry
102395677 CDS
T05912
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X2
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102395677 (MED13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102395677 (MED13)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
102395677 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
102395677
NCBI-ProteinID:
XP_025136954
EnsemblRapid:
ENSBBUG00015003115
LinkDB
All DBs
Position
3:complement(52067040..52164497)
Genome browser
AA seq
2174 aa
AA seq
DB search
MSSSFVPNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISSCLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWIKFSSVSDGFSSDST
SHHGGKIPRKLANHVVDRVWQECNMNRAQNKRKYSASSGGLCEEETADKVASWDFVEATQ
RTNCSCLRHKNLKPRNPGQQGQAPSLSQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRV
SVSDDVGMDTDSASQRLVISAPDSQVRFTNIRTNDVAKTPQMHGTEMANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLIPSKPVEDGIDSLSQSFPAQFQEAVEPTIYV
GTAVNLEEDEANIAWKYYKVPKKKDLEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDELVQQYQIKNQYLSAIASDSEQEPKIDPYAFVEGDEEFLFPDKKDRQNNER
EAGKKHKVEDGPSSVTVLSHEEDAMSLFSPSIKQDAPRPAGHARPPSTSLIYDSDLAVSY
TDLDNLFNSDEDELTPGSKKSANGSDDKSSCKESKTGNLDPLSCISTADLHKMYPTPPSL
EQHIMGFSPMNMNNKEYGSMDTTPGGTVLEGNSSSIGAQFKIEVDEGFCSPKPSEIKDFS
YVYKPENCQVLVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLELLSSGPTTPFI
KEGDGSTMDQEYGPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRT
PRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSES
VMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGL
FLEDELDIIGRNTECGKEAEKRFEALRATSAEHVNGGLKESEKLPDELILLLQDQCTNLF
SPFGAADQDPFPKIGVTNNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSC
LHPWSKRNDVSVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRG
SYGTDESPEPLPIPTFLLGYDFDFLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEA
LLNGAKSFFRDLTAIYECCRLGQHRPISRLLTDGIMRVGSTASKKLSEKLVAEWFSQAAD
GNSEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPTSQSLITPPQMTGTGNAK
TPSATPASTVSSTMTVSSGVAVSSSVATANSTLTTTSTSSSLSSNLNSGMSSNKLPSFPP
FGTMNSSATGSMSTQASTVPNSQLGGQPPSALQTAGISGESASVPTQPHPDVSESTMDRD
KVGIPTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPH
IKNTVSVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGP
GLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEPGQKYNVLFVGYCLSHDQ
RWILASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRV
VIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQ
GSFVIMPDSVSTGSVFGRSSTLNMQTSQLNTPQDISCTHILVFPTSASVQVASATYTTEN
LDLAFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDAGKG
QGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASL
HLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHF
VVLNQLYNFIMNML
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgccgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggctgacttgacgggaattaaatggaagagatatgtatggcaaggcccaacttct
gcccctattctgtttccggtgacagaggaagaccccattttgagcagttttagtcgctgc
ctgaaggcagatgtacttggtgtttggcggcgtgatcagagacctggaagaagagaattg
tggatattttggtggggtgaagaccccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtgtgggagaatggactttcctatgaatgccgaactttgcttttc
aaagcagttcacaatctgttggaacggtgtttaatgaaccggaactttgtacgtattggc
aagtggtttgtgaagccttatgaaaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aatcaacatcaacctgtataccttcttagtgaagaacatatcacccttgctcaacagtct
aatagcccatttcaagttatcttaagcccatttggactaaatggcactctcacaggacag
gcattcaagatgtccgattcagctacaaaaaaattgattggtgaatggaaacagttctat
cctatctcatcttgtttgaaggagatgtctgaagaaaaacaggaagatatggattgggaa
gatgattctttagctgcagtagaagttcttgttgctggtgtccgaatgatctacccagca
tgctttgttctagtccctcagtcagacattcctactcctagctctgtgggatcctctcac
tgttcagcttcttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgctatg
tcttcggttactcttacaccacctacatctcctgaggaagtccaaacagttgatcctcag
tctgcccagaagtggatcaaattttcttcagtatctgatggcttcagctcagatagtact
agccatcatggtgggaagatacccagaaaattagcaaatcatgtggtggatagagtttgg
caagaatgtaatatgaacagagcacagaacaagaggaagtattcggcttcatcaggtggt
ctgtgtgaagaagagacagctgataaagtagcatcctgggattttgttgaagccacacaa
agaacaaattgcagctgtttgagacacaaaaatctcaaacctagaaatcctggacaacaa
ggacaggcaccatctttaagtcagcaacaacaagtacttccgaagcacaagaccaatgaa
aagcaagaaaagagtgaaaaaccacaaaaacgccccttgactccttttcaccatcgtgta
tctgttagcgatgatgttggcatggacacagattcagccagccaaagacttgtgatctct
gctccagacagtcaagtgagatttacaaatatccgaactaatgatgtagcaaagactcct
caaatgcatggcactgaaatggcaaattcacctcaaccacccccacttagtcctcacccc
tgtgatgtggttgatgaaggagtgactaaaacaccctcaactccacaaagtcaacacttt
tatcaaatgccaacaccggatcccttgattccttctaaaccagtggaagatgggatagac
agtttatcccagtctttcccagctcaattccaggaagctgtagaacctacaatatatgtt
ggtacagcagtaaacttggaagaagatgaagctaatatagcctggaagtattacaaggtc
ccaaagaaaaaagatttagagtttttaccacctcaacttccaagtgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcaa
tgtaagaaacctttaaaagtttctgatgaattagtgcagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgattcagaacaagaacctaaaattgatccatatgcattc
gttgaaggagatgaggaattcctttttcctgataagaaagatagacaaaataatgaaaga
gaagctggaaaaaaacacaaggtagaagatgggccgtctagtgttacagtgttatcacat
gaagaagatgctatgtcattatttagtccctctatcaagcaagatgctccccgccctgct
ggtcatgcccgacctccatcaaccagtttgatttatgactcagacctggctgtctcttat
actgaccttgataatctttttaattctgatgaagatgaactgacacctggatctaaaaaa
tcggcgaatggatcagatgataaatccagctgcaaggaatcaaagacaggaaatctggac
ccattatcttgcataagcactgcagatcttcataaaatgtatcctacaccaccatcattg
gaacaacatattatgggattttccccaatgaatatgaataataaagaatatggtagtatg
gatacaacacctggaggaactgttctagaaggaaatagttctagtattggagcacagttc
aaaattgaggttgatgaaggattctgtagcccaaaaccttctgaaattaaagatttttct
tatgtgtataagcctgaaaattgtcaggttctagtgggatgttccatgtttgcacctcta
aaaactctaccaagccagtgtctgcctcctatcaaattgccagaagagtgtatttaccgt
cagagctggactgttggaaagttagaattgctttcttcagggcctacaacgccattcatc
aaagagggtgatggaagtactatggatcaagaatatggccctgcttatacacctcagact
catacttcctttgggatgcctcctagcagtgcacctcctagtaacagtggagcaggaatt
cttccttctccgtctacccctaggtttccaactccaaggaccccaaggactccaaggact
cctcgtggagctggtggaccagctagcgctcaaggttcagtcaaatatgaaaattcagac
ttatattcaccagcctccaccccatccacctgcagaccccttaattctgttgaacctgca
actgttccttccatccctgaagcacacagtctttatgtaaacctcattctttcagaatca
gttatgaatttgtttaaagactgtaactttgatagttgctgtatctgtgtttgcaacatg
aatatcaagggtgccgatgttggagtttacattccagatccaacacaggaagcacagtat
aggtgtacttgtggcttcagtgctgtcatgaacaggaagtttggcaacaattcaggatta
tttctagaagatgaactagatatcataggacgcaacacagaatgtggcaaagaagcagaa
aaacgttttgaagctctcagggccacttctgctgaacatgttaatggaggactaaaggaa
tccgaaaaattgcctgatgaattgatactattgcttcaagatcagtgcactaatttattt
tcacctttcggagctgcagaccaagatccctttcccaaaattggtgtaactaacaattgg
gtacgtgttgaagagcgggactgttgcaatgactgctaccttgcattagaacatgggcgt
cagttcatggataacatgtcaggaggcaaagttgatgaagcacttgtgaaaagttcatgc
ttacacccctggtccaaaagaaatgatgtgagtgtgcagtgctcacaagatatacttcga
atgctcctatcacttcagccagttcttcaggatgctattcagaaaaaaagaacagtaagg
ccttggggggttcaaggtcctctcacttggcaacaatttcataaaatggctggccgaggc
tcttatggaactgatgaatccccagaaccactgccaatccccacgtttttgttgggttat
gattttgattttctggtgctttctccatttgctctcccttattgggagagacttatgcta
gaaccctatggatctcaaagagatatagcctatgttgtactctgtccagaaaatgaagcc
ttgttaaatggagccaaaagcttttttagagatcttactgcaatatatgagtgttgtcga
ttgggtcaacatagacctatttctcgattattgacggatgggatcatgagagttggatct
actgcatcaaagaaactatcagaaaagttggtagcagaatggttttctcaggcagctgat
ggtaacagtgaagcattttctaaactcaagctttatgcacaagtctgcagatatgaccta
ggtccttatcttgcttcccagccattggacagctctttactttcccagccaaatttagtt
gcccctacaagtcagtctttgattacaccacctcagatgacaggtactggaaacgctaag
actccgtctgccaccccagcatctacagtgagcagcactatgacagtgtcttcaggtgtt
gccgtgtcctcttcagttgccacagctaactcaaccttgactacaacttcaacttcatct
tcgttgtcctccaacttgaacagtggaatgtcatcaaataaactgccttcatttccacct
tttggcactatgaacagtagtgctacgggatccatgtctacacaagcaagtacagttccg
aatagccagctaggagggcaacctccatcagctctacaaacagctggcatttctggagag
tcggcttcagttcccactcagccacatcctgatgtgtctgaaagcacaatggatcgagac
aaagtgggcattcccacagatggtgattcacatgcaatcacttatccacctgcaattgtt
gtttatataattgacccttttacatatgaaaataaagatgagagcactaattcttctaat
gtatggactttggggttacttcgatgttttctggaaatggtccagactcttcctcctcat
attaagaatactgtttctgtacagattgttccctgtcagtacctgttgcaacctgtgaag
catgaagatagacaaatctatacccagcatttaaaatctctggctttttcggcctttacc
cagtgtcgaagaccacttccaacatcaaccaatgtgaaaacattgactggttttggtcca
ggtttagccatggaaacagctcttaaaagtcctgatagaccagagtgtattcgactttac
acacctccttttatcctggctccagtgaaggataaacaaacagagctaggagaaaccttt
ggggaacctggacagaaatataatgttcttttcgtgggctactgtttatcacatgatcaa
agatggattcttgcatcttgcacagatctatatggagaacttttagaaacttgtatcatt
aacattgatgtcccaaacagagctcgtcggaaaaaagggtctgctagaagatttggtcta
cagaaactttgggaatggtgcttaggacttgtacagatgagttcattgccatggagagtt
gtaattggccgtctaggaaggattggtcatggagaattaaaagattggagctgtttgctg
agtcgtcgaaacctgcagtctctaagtaaaaggctgaaagacatgtgtagaatgtgtggt
atatctgctgcagactctcctagcattctcagtgcttgcttggtagcaatggaaccccaa
ggctcttttgttatcatgccagattctgtgtcaactggttctgtattcggaagaagctcc
actctaaacatgcagacgtctcagcttaataccccacaggatatatcatgtactcatata
cttgtgtttccaacttctgcttctgtgcaagtagcttcagctacttataccaccgaaaat
ttagacttagctttcaatcccaacaatgatggagcagatggaatgggtatctttgattta
ttagacacaggagatgatcttgaccctgatatcattaatatccttcctgcatctccaacg
ggttctcctgttcattctccaggatctcattacccccatggcggtgatgctggcaagggt
caaggtactgatcgactactttcaacagaatctcatgatgaagtaactaatattcttcag
caaccattggctcttggttactttgtatcaactgccaaagcgggtcccttacctgactgg
ttctggtcagcatgtcctcaagcacaatatcagtgtcccctttttcttaaggcctctttg
cacctccacgtgccttcagtgcaatctgacgagctgcttcacagtaaacactcccaccca
cttgactcaaaccagacttcagatgtcctcaggtttgttttggaacagtacaatgcactc
tcctggctaacctgtgaccctgcaatccaggacagacgctcatgtctcccaattcatttt
gtggtgctgaatcagttatataactttatcatgaatatgctgtga
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integrated database retrieval system
