Bubalus bubalis (water buffalo): 102395750
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Entry
102395750 CDS
T05912
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102395750 (CHD6)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102395750 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
DUF3437
Motif
Other DBs
NCBI-GeneID:
102395750
NCBI-ProteinID:
XP_025119238
EnsemblRapid:
ENSBBUG00015017992
LinkDB
All DBs
Position
14:13474111..13675827
Genome browser
AA seq
2766 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVPNHSPMSDASVNFDYTSPSPFDHSTDQEEKIEDVASHCPAPKE
LYDVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGEHEGAAKGSKDREPKPKR
KREPRELKEPRKAKEPRKAKEPREPKQKDGAKKTRKPREASGPREAKEKRGGPDAAARTK
SRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLSKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLL
SAEQGVTDGASDVPERGHTDKEDNTEDKVDGLQKQMESSSDGGDGLFAEKKDDTRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEVLGLGNQSYWVQEEMFRRSSEME
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISRLDKKPDESLEHYFY
SFVSMCRRVCRLPAWKDGGEGALPLYSQGDTEGPPDPSIYVEPITEERAARTLYRIELLR
KVREQVLTCPQLHERLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYVMTDPQL
SFLDAYRNYAQHKRPDPQGPESLCCLYQTNSKLYESLAYTHTSRTSESLENEPENLMKIE
GRDDHLGPPRGSLSDMTCESFISKTQDVLSLTHDESLLPGSLEAMMYGKKALSQEPGPFQ
GSTGASTESRQDTVAISAGRDGNCQPRGHEAKIASDPSFMETLEAGVAQMNIKNEKHLLI
SLSKEGELGCSEAGPRPESIGQLDSNCFASPSLDPGNESGFVDMCNLSVCDSRRNVSSDQ
QLIDLLESKSLESKLVLGPNHSDEEDDEDENEEESLELAAGRREGLAVSPLSEPATRMAG
EQSLAGFLTEEAKKGRAEARSQPPGPQGPFLPAACQCHCKHAERWARGFEKDEFEVEKPQ
AYPPDPFTSKANNVTVRGEPTSVPPELFQVKQELLKEPWKESTEGNQGLPPYPEGSELKP
EDMDYESKEEFDKDGNCQSQDYPGKYSEEESKSSTSGITGDLGDDLQEARAPTIAQLLQE
KTLYSFSEWPKDRVIISRLDNICHVVLKGKWPSSQQCEPSGALPTPVLTSSAGPRSGISE
PEASEHSFSSGAALVAQMQKESFLAPVFTKDEQKHRHPYEFEVERDAKTRSLEQFSASHG
HPPIVLNGWHGESAIDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQA
GLIHPVTGQIVNGSLRRDDAASRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQA
PLSTPHLPEGPVPATSTPEPTPAAGSPAEKAIPSKSLLDWLRQQADCSLEVPGFGAKSQP
TSECQARKATCVTSYQDSEPPLGPPFTNFSDKPKQRRPRCKEPGTLDVTSLSGEERVPAV
PKEPGLRGFLPENKFNHTLPEPVLRDAGPRRRGRRPRSELLKTPALVADAPSGMGPLFMN
GLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFTAMPPGEEVKSTLSMLPMVLPGMAAVPQ
MFGVGGLLNAPMATTCASAVPAPLSSTTKGSAAAAEKTAEDQPGSHNVKTDPSAEDKPGP
SPFSSDQPEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPSMGMALPAMQQARHSEAAG
LESQRRKRKKTKGDAPNPNPEPVPGLEREPGSKQSCPEPRAPAPPDREHAAQAREGGPQD
SHGDTN
NT seq
8301 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaagtctaaaagttccgaatcac
tccccaatgtctgatgcctctgtcaattttgactacacatccccctccccatttgaccac
agcactgaccaggaggagaaaatcgaagatgttgccagtcactgtccagccccgaaggag
ctgtacgacgttgaagaggaggccgggccccttttccccaggaaaacggcgtcccataac
ggtatggaggacagtggcggaggaggcacgggcgtgaagaagaaacgcaagaaaaaggat
ccaggggagcacgaaggggcagcaaagggaagcaaggacagggagcctaagccaaagagg
aagcgcgagcccagagagctgaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccagggagcccaagcagaaggacggtgccaagaagacgcggaagccgcgcgaggcc
tcaggccccagggaggccaaagagaagaggggcggccccgacgctgcagccaggacgaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaatccatcc
ctgcggagccccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaagacctggacttcaaggtggtggacgatgacggg
gagaccattgccgtgcttggggccggccggacgtctgccctctcagcttcgaccctggcc
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggtccacccgggagaacccccattcgacctggagctgttctatgtc
aagtatagaaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gaccctcgcatcgcacagaagatcaagcgatttaggaataagcaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactatgtggaggttgatcgcatc
ttagaggtggcccataccaaggatgcagaaaccggagaggaggtgacgcattacctggtg
aagtggtgctcactgccttatgaagagagcacttgggaactggaggaggacgtggatcct
gccaaagttaaagaatttgaatctctgcaagtgctccctgaaatcaagcacgtggagcga
cccgcttcagactcctggcagaaacttgagaagtcgcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggccgatgagatgggcctagggaaaaccatccagtccatcacgttcctt
tcagaaatattcctcaggggcatccacggccctttcctcatcatcgccccactctccacc
atcaccaactgggagcgggagttccgaacgtggacagagatgaatgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtacgagatggtgtacagagacgcacag
ggaaaccccctctcaggtgtcttcaagttccatgttgtcattacaacatttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcc
cacaggttgaagaacaggaactgcaagcttctggagggcctgaagctcatggccctggag
cataaggtgctgctcacggggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccatcacagttcccttcagagactgctttcttggaggagtttgga
gatctgaagacagaggagcaggtgaagaaactgcagtctatcctcaaaccgatgatgctt
cggcggctaaaagatgacgtggaaaagaacctcgctcccaagcaagagacaatcatcgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgagcaagggggccaaccagcacaacatgcccaacctcatcaacaccatgatggag
ctgaggaagtgctgcaaccatccctacctgatcagcggggcagaggagaaaattctggag
gacttccggaaaacccacagccccgatgccccggactttcagctgcaggccatgatccag
gccgcagggaagctggtgctgattgataaactgctccctaagctgatcgctggcggccac
aaagtgctcatcttctcgcagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccggtgtcaccggataggccagagtaaa
gccgtcaaggtgtatcgcctcatcacgcggaactcctacgagcgagaaatgttcgacaag
gccagcctgaagctgggcctggacaaggccgtccttcaggacatcaaccggaagggcagc
acgaatggcgtacagcagctctcaaagatggaggtagaggacttgctccggaaaggtgcc
tacggcgccttgatggatgaagaggacgaaggctccaagttctgtgaagaagacatagac
cagatcctgcagaggaggacacataccatcaccatccagtctgaggggaaaggatccact
ttcgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaagtgggctaaaatagctgaactggacactgaagcaaagaatgagaag
gagagcctggtgctcgaccgcccgcgcgtgcggaagcagaccaaacactacaactctttc
gaggaggacgagctcatggagttttcggagctggacagcgactctgacgagaggcccaca
aggtcccggcgcctcaatgacaaaaccaggcgctacctccgggccgagtgcttccgggtg
gagaagaacctgctcatcttcggctggggccggtggaaggacatcctgacgcatgggcgg
ttcaagtggcatctgaacgagaaggacatggagatgatctgccgggccctgctggtgtac
tgcgtcaagcactacaaaggggacgagaagatcaagagcttcatctgggagctgatcacg
cccaccaaagatggacaggcccagacactccagaaccactcaggcttgtccgctccggtc
cctagagggaggaaggggaagaagacgaagaaccagctgctgctcccggagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttacatgacgatggctacaagaag
cacctcaaacagcactgcaacaaggtacttctgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagctgataaagcatttgaaggaactccagccagggagctg
gacgtgcccctgcctgacattgactacgtggagatcccggtggactggtgggatgctgag
gccgacaagtccctcctgattggtgtgttcaaacacggttacgagaggtacaacgccatg
cgagccgacccagcactttgcttcctggagaaagtgggcatgccagacgagaagttgctt
tctgcagagcagggtgtcacagacggggcctcagacgtccccgaaagaggccacacggat
aaagaagacaatacagaagacaaggtagacggcctccagaaacaaatggagagttccagt
gacggaggtgatggcctttttgctgaaaagaaggatgacacccgggcagcccaggatggc
tccgacccagacaaatcaccctggccggtttcatccgcactcactgctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaagtcctggga
ctaggaaaccagagctactgggtccaggaagagatgttccggaggtcctcagagatggag
ctcatcaacaaggaagcccaaaagaggtggacaaggagggagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagagaagaaaacctttgactggacacag
tttcgcgtcatttcccgtctggacaagaagccggacgagagcctggagcactacttctat
agcttcgtgtccatgtgccgcagggtctgtcgcctgccagcctggaaggacggcggtgag
ggtgctctgccactctattcccagggggacacagagggccccccggatcccagcatctac
gtggaacccatcactgaagagcgggccgcaagaacgctgtaccgcattgagctgttgcgg
aaggtgcgggagcaggtgctcacgtgtcctcagctgcacgagcgcctgcagctctgcagg
cccagcctgtacctgcccgtctggtgggagtgtgggaagcacgaccgagacctgctgatc
ggcaccgccaagcatggcctgaaccgcactgactactatgtcatgactgacccccagctg
tccttcctggacgcctacaggaactacgcccagcacaaaagacccgacccccagggccca
gagagtctctgttgcctctatcagaccaactccaaactgtatgagtctctggcctatacg
cacacgagccggacttccgagtcccttgaaaacgaacccgagaacctcatgaaaatcgaa
ggtagagacgatcaccttggtccacccaggggcagcttatctgacatgacctgtgaaagc
ttcatctctaaaactcaagatgtcctttcccttacccatgatgagagtctgctgcctggg
tccttggaggccatgatgtacgggaagaaggcactaagccaggagccaggcccttttcag
ggcagcacgggtgccagtactgagtccaggcaagacactgtggccatctccgcaggcaga
gacggaaactgccagccccggggccacgaggcaaaaatagcctcagacccctcttttatg
gaaactttagaagcaggagtagctcagatgaacattaaaaatgagaaacacctattgata
tctctttcaaaggaaggggaacttggctgcagcgaggcagggccaagacctgagagcatc
gggcagctggactccaactgctttgcctccccttccttggacccagggaacgagagcggg
ttcgtcgacatgtgcaacctgagtgtctgcgactccagaagaaacgtgtcatcagaccag
cagttaatcgacttactagaaagcaaaagcttagaaagcaaattggttttgggtccaaac
cacagcgacgaggaggacgacgaggacgaaaacgaggaggaaagtctcgagctggccgca
ggcaggcgggaagggctggcagtgtcgcctctcagcgagcccgccacccgcatggcaggg
gagcagagcctggccggcttcctcacagaggaagccaagaaaggacgcgcggaggccaga
agccagcctcccgggccccagggccccttccttcccgcagcctgtcagtgtcactgcaaa
cacgcggagaggtgggcacgtggcttcgagaaagatgagtttgaagtggagaaaccccag
gcttaccccccagaccccttcacaagcaaagccaataatgtcacagtgaggggcgagccc
acttctgtcccacccgagctgttccaggtgaagcaggaactgctgaaggaaccctggaaa
gagagcacagaagggaaccagggtctccctccgtatcctgaagggagtgagctcaagccg
gaagacatggattatgagagtaaagaggagttcgataaagacgggaactgccagagtcaa
gattatccagggaagtactctgaggaggagagcaagagctcgacctcgggcatcacggga
gacctcggggacgacctgcaagaggcgcgggctcccaccattgctcagctgctccaggag
aaaacgctgtattcattctccgagtggccgaaggatcgcgtgattatcagccgcctagat
aacatctgtcacgtggtgttaaaggggaagtggccctccagccagcagtgcgagccctcg
ggcgcgctgcccacccccgtgttaaccagcagtgctggtccccgaagcggcatctcagag
ccagaggcatcggagcacagcttcagcagtggtgcagcgttagtggcccagatgcagaag
gagagcttcttggctccggttttcacaaaggatgaacagaagcacaggcatccttacgag
ttcgaggtagagagggacgcgaagacccggagcctggagcagttctcggcctcccacggg
cacccccccatcgtcctcaatggctggcatggagagtcagccatagacctctcctgcccg
tcggaggggtccccaggggccacgtcccctttcccagtgagcgccagcacccccaagatc
ggcgctattggttcactgcaaggagcccttggcatggacttgtcggggatcctgcaagct
ggcctgatccacccagtgactggacagattgtcaacggaagcctcaggagagatgacgct
gcctccaggaggcggagaggaaggcggaaacatgtcgacggaggggtggacctcatcttc
ctgaaggagcagaccctgcaggcgggcatcttggaagtccatgaagacccaggacaggcc
cccctgagcaccccacaccttcccgaagggccggtgcccgccacgtcgaccccggagccg
accccggctgccgggagcccggccgagaaagccattcccagcaagagcctgctggactgg
ctgcggcagcaggccgactgctccctcgaggtcccgggcttcggcgcgaaatcccagccc
acatcagaatgccaggccagaaaggcgacgtgcgtgacctcttaccaggacagcgagcct
ccgctcggccctcccttcaccaatttttcagacaaaccaaagcagaggaggccacgctgt
aaggaacctggaacgttagacgtcacctccctgagtggggaagagagggttcctgctgtc
cccaaggagcccggcctgagggggtttctcccagaaaacaagttcaatcacaccctgccc
gagcccgttctccgagacgcaggcccccgccgcaggggcaggcggccacggagtgagctg
ctgaagaccccggccctggtggcggacgccccctccgggatggggccgctgttcatgaac
ggcctgatcgccgggatggacctggtcgggctgcagaacatgagaaacatgccgggtatc
cccctcacggggctggtgggcttcccagccggcttcacggcaatgcccccaggcgaggag
gtcaagagcacgttgagcatgctgcccatggtgctgccgggcatggccgccgtgccccag
atgttcggggtcggggggctcctcaacgcccccatggccaccacctgcgcctcggccgtg
ccagcgcccctgtcaagcacaaccaagggcagcgctgcagcggccgaaaagactgcggaa
gaccagcccggcagccacaacgtcaaaacggacccatcagccgaagacaagcccggccct
agccccttttcctccgaccagcctgagcccgcaataactacgagcagccctgtggcgttt
aacccgttcctcatcccaggtgtttcccccggactcatctacccttccatgttcctctcc
cccagcatgggcatggcgctgccggccatgcagcaggccagacactccgaagcagcaggt
ctggagagccagaggaggaagcggaagaaaaccaagggggacgccccgaaccccaaccca
gagcctgtgcccgggctggagagggagccgggcagcaagcagagctgcccagaacccagg
gctcctgcgccccctgatagagaacacgcagcacaggcccgggaagggggcccccaggac
tctcacggtgacaccaattag
DBGET
integrated database retrieval system
