Bubalus bubalis (water buffalo): 102400325
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Entry
102400325 CDS
T05912
Symbol
POM121C
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102400325 (POM121C)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102400325 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102400325 (POM121C)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102400325 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
102400325
NCBI-ProteinID:
XP_006057170
EnsemblRapid:
ENSBBUG00015012926
LinkDB
All DBs
Position
24:8420223..8464197
Genome browser
AA seq
1216 aa
AA seq
DB search
MSPAAAAAGGGNRRRPIASVREGRAWGCGRPAGAALLGLSLLGLVLYLVPAAAALAWLAV
GATAAWWGLSREPRGSRALSSLVWNARRQRTLLASPPAKSAANGNLLEPRSPLEGPDPAE
LLLMGSYLGKPGPPQSAPAPEARDLRERPGRRPPVRTASPAQSVHPQRVQVHPSLPTSLL
RPSRRPSYRDCGTLSHRFVVTPRRRYPIQQAQYSLLGVLPTVCWNGCHKKTVLSARNSRM
VCSPVTVRIAPPDSKLARSPVPEQIINSTLSSPSTSAPDPCAKETVLNALKERKKRTVEE
EDQIFADGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLNSQNSDDHLNK
RSRTSSVSSLTSSTYTGGIPSSSRNAITSSYSSSRGLSQLWKRSGPSSSPFSSPASSRSQ
TPERPAKKVREEELSHHSSSSTPLVTDKESQGEKIADPTTGKKQNSWNSPSTPGSSGQRK
RKVQLLPSRRGDQLTLPPPPQLGYSITAEDLDLEKKTSLQWFNKVLEDKTDAASTSVTEA
PPASQSSFTLTLPAAGTASSPTSLQAPSTNPLLESLKKMQNSPGLPSLPEPAGVTSTVAD
SPPKTPSSLASLSSSQSGALPATSSDSRSTTTVLGLTPASSPGPVTDAAKSPPAPSAETS
TKSQALSTPPPSPKQSILFGMLSTPAASPSASVAPAASSASPMFRPIFVAPLKSESGDPL
PSSPSTVTAVASSSSALPTTASSTAPAFKLIFSSVGPPTSVPGLTPFLKQTATLATTTSA
PVFTGQATATSTVTSVTTASTSTDSAPKPAFSFGASSVTSTLSSGTSTTASASQPFLFGT
PPTSGASFTPAGGSIFQFGKPPAVAASTPVTTFGQSLPSAPQTAPSSSGGGSTGFGGFGS
SLSTPAPATTGQPALTVSSTATPAFSVPFASGAQPPLPSYPGANPQPTFGAAEGQPQGAA
KPALVPSFGSSFTFGNSAAPAPTATPAPTPAQPAFGGAAQPAFGSLKATPSAFGTSAATR
PAFGSATAVFSFGAATTSGFGATTQTTSSGTSGSVFGSTTPSPFMFRGPATPAGSGAFGM
SVATPGTSAASGAFGFGAGQSGTTGSTAPFGGGLSQNSLGTPNQTTSFAFSVTSTPDSKP
VFGGTSTPTFGQNTPAPGVGAAGSSLPFGASSTPAQGFGGVGPFGSTAASFSIGAGSKTP
GTRQRLQARRQHTRKK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctggaggaggcaaccgacggcggccgatagcgagtgtc
agggagggccgcgcctggggctgtggccggccggccggggcggcgcttctcggcctgtcg
ctgctcggcctcgtgctgtacctggtgccggcggcggctgccctggcctggctggctgtg
ggggctactgcggcctggtggggactgagccgcgagccccgaggttcgcgcgcgctctcc
tcgctcgtttggaacgcgcggcgtcagcgaacactgctcgcctcgcctcctgccaaatcg
gcagcaaacggaaatctcctagagccgcggagcccgctcgaaggacccgaccccgctgaa
ctgctcctcatgggcagttacctgggcaagcccggccccccgcagtctgcccccgccccg
gaggccagggacctgcgggagaggccgggccgccgccctcccgtccgcaccgcgtcgccg
gctcagtcggtgcatccccagcgtgttcaagttcacccctccctccccacttctcttctc
cgaccctccaggaggccttcctaccgggactgtgggactttatcacatcggtttgtagta
acacctcgaaggcgctatccaatccagcaggcccagtattccttgctgggggtacttccc
acagtatgctggaatggttgtcacaagaagactgtgctgtctgctcgtaattccagaatg
gtgtgcagccccgtgacagtcaggattgcacctccggatagcaagctggctcgctctcca
gtaccagaacagattatcaactcaacactgtcttcaccatcaaccagtgccccagatcca
tgtgcaaaggagactgtattgaatgccctcaaagagagaaagaaaaggacagtggaggag
gaagaccaaatatttgctgatggccaggaaaataaaagaagacgccatgatagcagtggg
agcggacattcagcgtttgagcccctcgtagccaatggagtccctgcttcttttgtgcct
aagcctgggtctctgaagagaggtcttaattcacagaactcagatgatcacctgaataag
agatcccgcacctcttctgtgagctccttgacaagcagcacgtacacaggcggcatcccc
agctccagccgcaacgccatcaccagttcctacagctcctcgcgtggtctctctcagctg
tggaagaggagtggtcccagttcatctccattctctagcccagcctcatcccgctcccag
acaccagagaggccagcaaagaaagtaagagaagaggagctttctcatcattctagttct
tcaactccattggtaacagacaaggagtcccagggagaaaagattgcagatccaaccaca
gggaagaagcagaactcatggaattccccatcaacacctggcagctccgggcagcgtaaa
cggaaggttcagctgctgccctccaggcgaggagaccagctgaccttgcctccacctccc
cagcttggttattcgatcactgctgaggacttggacttggaaaagaaaacttcgttacag
tggtttaacaaagtcttagaggataagactgacgctgcctcgacctctgttaccgaggcc
ccacctgccagtcagtcttccttcactttgaccctgcctgccgctgggactgcttcatcc
ccaacctccctccaagcccctagcactaacccactgttggagagcttgaagaagatgcag
aattccccagggctaccttccctccctgagcctgctggagtgaccagcactgtggccgat
tcgcccccaaagacacccagttctctggcctctctgagctcctcacagtcaggagccctt
ccagccacctcctctgactccagatccaccactactgtcttggggctgaccccagcttct
tccccaggacctgtcaccgatgccgccaagtcccctccggccccttcggctgagacatcc
accaaatcccaggccctgtccaccccgcctcccagccccaagcagagtatcctgtttgga
atgctgagcaccccagctgccagcccttctgcttctgtagcccctgctgcgtcttcggca
tcgcccatgttcaggcccatttttgtggcccccctgaaaagcgagagtggggaccccttg
ccctctagcccttccacggtcacggccgtggcatcttccagctcggccctccccacgact
gccagcagcacagcccccgctttcaagctgatctttagcagcgtggggccacccacatct
gtgcccgggctaactcccttcttgaagcaaacagctactctggccactaccacgagtgct
cctgtcttcaccggccaggccactgccacctccacagtgacttccgtgaccacagccagc
acctccacagactcggctccgaagcccgcgttcagcttcggtgcgagcagcgtgaccagc
accctgagcagcgggaccagcaccactgcttccgcctcccagcccttcctctttgggact
cccccgacttctggtgccagcttcaccccagctggaggctccatattccaatttggcaag
cctcccgccgtggccgcctccacaccagtcaccaccttcggccagtcgcttcccagtgcc
cctcagacagcccccagcagcagcggcggcggcagcaccggcttcggtggttttggcagc
agcctcagcacccccgccccagccaccactggccagcccgccctgacggtcagcagcacc
gccaccccagccttcagcgttcccttcgcctcgggcgcccagccccctctcccatcctac
ccgggtgccaacccccagcccaccttcggggccgctgaggggcagccgcagggggctgcc
aagccggctctcgtgcccagctttggcagctctttcacttttggtaactctgcggcccca
gccccgactgcgaccccagcgccgaccccagcccagccagcgttcggcggcgccgcgcag
ccggcatttggcagcctgaaagccacaccctccgcctttggcacctccgccgccacccgg
ccggcctttggcagcgccacagctgttttctcctttggtgcggccaccacctctggcttt
ggcgctaccacccagactaccagcagcgggaccagcggctcggtgttcggcagcacgaca
ccgtcgcccttcatgtttcggggaccagccaccccggctgggagcggggcctttgggatg
agcgtggccaccccgggcaccagcgctgcctctggagcgttcggcttcggggcaggacag
agtgggaccactggcagcacagcgccttttgggggaggcttgagtcaaaacagcttgggc
acgcccaaccagaccacgtcctttgccttcagtgtgaccagcacgccggacagcaaacct
gtgtttggaggcacctccacgcccaccttcggtcagaacaccccagcccctggggtggga
gcagctggcagcagcctcccctttggggcgtcctcaacacctgcccaaggctttggcgga
gtcggacctttcggatcgacagccgcttccttttccattggtgcgggatctaagacccca
gggactcgacagcggctacaggcccggaggcagcacacccgaaagaaatag
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