Bufo bufo (common toad): 120978258
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Entry
120978258 CDS
T07950
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbuf03041
]
120978258
Spliceosome [BR:
bbuf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120978258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
Dicer_dsRBD
SGP
Sec16
DUF6857
Motif
Other DBs
NCBI-GeneID:
120978258
NCBI-ProteinID:
XP_040262425
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All DBs
Position
8:38397070..38478374
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AA seq
670 aa
AA seq
DB search
MRSIRSFANDDRHVMAKHSTIYPSPEELEAVQNMVSTVESALKHVSDWMDERSKSSTVEN
EQQIKAEEKEENAMDESGQVLCGVMRIGLVAKGLLIKDDMELELVLMCKEKPTESLLVTV
RENLPLQIQKLTEESYQVEHSIEDASIIIHNSKEPKLTLKVILTSPLIREEEDRAGGVEN
VAMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWARLKG
WPLEIICEKAIGTCNRPLGAGEALRRAMECLASGIILPGGPGLHDPCEREPTDALAYMTV
KEREEITQSAQHALRLLAFGQIYKVLQMDPLPSNKPFQKYSWSSTDREGLKRPYDDGSSD
DKDPNKKMRRNLRKVLDSKAIESNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSV
DVDGTTHEASGQSKKTAKLHVAVKVLQAMGYPTGFDTDMECLSSDEKSDSEGKNETVSSN
SSSNTGSSSTDGSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRFV
MEVEVDTQKFRGAGPNKKVAKASAALAALEKLFSGPNAVNIKKKKITPQTKGVVSTAVSA
AVQAARGRGRVALARGAFVGAAAAPGYITQGYAAPYGYSAAAPAYGIPKRMVLLPVMKFP
AYPVPHYSFF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagatccattcgatcatttgctaatgatgatcgccatgttatggcaaaacactcgacc
atatacccctctccagaagagctggaagcggtccagaacatggtgtctacagtggaaagt
gccctgaagcatgtctcagactggatggatgagcgcagtaaaagttccactgtggagaat
gagcagcaaatcaaagctgaggaaaaggaagaaaatgccatggacgagagcggtcaggtg
ctatgtggagtcatgagaattggccttgttgccaaaggcttactcattaaggatgatatg
gagctagaactggttctcatgtgtaaggagaaaccaacagagagcttattagtaacagta
cgagaaaaccttcctctacaaatccagaaactcacggaagagtcctatcaagtggagcac
tccatagaagatgcatcgataatcatacataattcaaaggaacccaaattaacccttaaa
gtgatactaacgtcgccactgatccgagaagaggaagaccgcgcaggtggagtagaaaat
gttgcgatgaaagatcctccggacttattggacaggcagaaatgcctgaacgccttggcg
tctctgcgacatgccaaatggtttcaggcaagagcaaatggattaaaatcttgtgtaatt
gtactccgcattctgcgcgatttgtgcaacagagtccccacctgggcgcggctgaaagga
tggccactagaaatcatatgtgaaaaagcaatagggacgtgtaacagacccctgggtgct
ggggaagcgttgcggagagccatggaatgcctggcatctggcataattttgcctggaggg
ccaggtttacatgatccatgtgaaagagaacccacagatgccttggcctacatgaccgtg
aaagagcgagaggagatcacacaaagtgcacagcatgcactgcgtttattagcttttgga
caaatatacaaagtcctgcagatggaccctctcccctctaataagcccttccagaaatat
tcttggtcaagcacagacagggaaggactgaagagaccatatgatgatggttctagtgat
gacaaagacccaaataagaaaatgagacgcaacttacgcaaggttttagacagcaaagcc
atagaatcaaaccagccaatgaatgcactgatgagactgaaccagatcaggcccggcctg
cagtacaagctgctgtctcagtcaggtccagtgcacgcaccagtcttcaccatgtctgta
gatgtagacggcacaactcatgaggcctctggacaatccaagaagacagccaagctccat
gttgcagtaaaggtcttacaggctatgggttaccctacaggctttgacacagatatggaa
tgtcttagttcagatgaaaaatcagatagtgaaggaaaaaatgagactgtctcttcaaat
tcaagcagtaacacaggaagctccagcacggatggctccaacactctcgaggtcaggact
cagggtcccattcttacggccagtgggaaaaatcctgtcatggagctaaatgaaaagaga
agagggctgaaatatgagttaatatcagagagcgggggaagccatgataagcggtttgtg
atggaggttgaagtggacacacagaagttcagaggcgctggtccaaacaagaaagtagcg
aaagccagtgcagcactcgctgctcttgagaaactcttctccgggccaaatgcagtaaat
atcaagaagaaaaagattactccacagacaaaaggagtagtcagcacagcggtatccgcc
gccgtacaggcagctcgaggacgtggacgagtggcattggcacggggagcctttgtgggg
gctgcagctgctcctggctacattactcaaggttatgcagccccgtatggatacagcgct
gctgcacccgcttatggaatcccgaagaggatggttctattaccagttatgaaatttcca
gcatatccagttccccactactcctttttttaa
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