Bufo bufo (common toad): 120995399
Help
Entry
120995399 CDS
T07950
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03082
ATP-dependent chromatin remodeling
bbuf03083
Polycomb repressive complex
bbuf04110
Cell cycle
bbuf04330
Notch signaling pathway
bbuf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120995399 (HDAC1)
03083 Polycomb repressive complex
120995399 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120995399 (HDAC1)
04350 TGF-beta signaling pathway
120995399 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120995399 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
120995399 (HDAC1)
Enzymes [BR:
bbuf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120995399 (HDAC1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120995399 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
120995399 (HDAC1)
BRAF-HDAC complex
120995399 (HDAC1)
REST complex
120995399 (HDAC1)
SHIP complex
120995399 (HDAC1)
MiDAC complex
120995399 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120995399 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120995399 (HDAC1)
Chromatin remodeling factors
NuRD complex
120995399 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120995399
NCBI-ProteinID:
XP_040280506
LinkDB
All DBs
Position
3:368245203..368279367
Genome browser
AA seq
479 aa
AA seq
DB search
MAYTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
SVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFMKTFNLPLLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQIQPIPEDSIQDDSGDEDEDDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRSVANYKKAKRAKTEDEKDEDKKDVKEEDKLKDEKPDAKRVKEETKTA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacacgcagggaacaaagaagaaagtgtgctattattatgatggggacgttggc
aactattactatgggcagggacatcccatgaaacctcacagaatccgtatgacgcacaat
ctgcttttgaactatggactgtaccggaagatggaaatctatagacctcacaaagctaat
gcggaagagatgacaaaatatcacagcgacgattacatcaaatttcttcgctctatcagg
ccagataacatgtcagaatacagcaagcagatgcagaggtttaatgtaggggaggactgt
ccagtgtttgacgggttgtttgagttttgccagttatcagctggaggctctgtagcaagt
tctgtgaaattaaacaagcagcaaacagacattgccgtaaactgggcaggtggactacat
cacgctaagaagtctgaggcctcaggattttgttatgtcaatgacattgtccttgccatt
ctggaactattaaaatatcatcagcgggtactgtacatcgatattgatattcaccatggt
gatggtgtggaagaagctttttataccactgacagagtcatgactgtttctttccataag
tatggagagtattttccaggcactggggacttaagggacattggagcagggaagggtaaa
tactatgcagtgaattacccacttcgagatgggattgatgatgaatcgtatgaagccatt
ttcaaaccagtcatgactaaggttatggagatgtaccagcccagcgctgtggttctacag
tgtggtgcagactccctttctggggacagacttggctgcttcaatctaaccattaaagga
catgctaaatgtgtggagtttatgaagacattcaaccttccattgttgatgctcggtggt
ggtggctacacaatcaggaatgtggcccgctgctggacatatgaaactgctgttgcgcta
gacacggagatccccaatgagcttccttacaatgactattttgaatattttggccccgac
ttcaagcttcacatcagtccttccaacatgacaaaccaaaacacaaatgaatacctggag
aagatcaagcagcgactgtttgagaacttgcgtatgcttccacatgcccctggagtccag
attcagcccatccctgaggactctattcaggatgatagtggtgatgaagacgaagatgat
ccagacaaacgtatttctattcgatcttcggacaagagaattgcttgtgatgaggaattc
tcagattcagaagatgaaggggaaggaggacgtaggagtgttgcgaattacaaaaaggca
aagcgtgccaaaaccgaagatgagaaagatgaagataagaaagatgtcaaagaggaggac
aagctgaaagatgagaagccagatgctaaacgggtaaaagaagagaccaaaactgcctga
DBGET
integrated database retrieval system
