Bufo bufo (common toad): 121003291
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Entry
121003291 CDS
T07950
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121003291 (CHD6)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121003291 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
MUN
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
121003291
NCBI-ProteinID:
XP_040290950
LinkDB
All DBs
Position
6:complement(329261017..329449715)
Genome browser
AA seq
2648 aa
AA seq
DB search
MIMKIQKEPQLPSLKALSYSPMSSASISCERQVLAPFSESSLEDFHPVTLLDTPSRLLPE
NELYPGQETCELSSLTNLNGIEDSGGGGTGVKKKRKKKEQGEEKETKPKKKKEPKKEKVK
EPKKVKEPKEAKEPKQPKNPKEPKKPRKPKEPKPPKEKKVNSDTVAKTKSKKTSKEQGPT
PVEKKKKGKRKAESCEDTLEGELSMLNSGSQSTEESESLDSQKRRSGRQVKRRKYNEDLD
FKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIERILSSKVVQKELIPGGM
PLEVEEFFVKYRNFSYLHCKWATLEDLEKDPRIQQKIKRFRNKQAQMKHIFTEPDEDMFN
PDYVEVDRVLEVAHTKDSDTGEEVTHYLVKWCSLSYEESTWELEEDVDPGKVKEFETLQV
LPDINVTERPSSESWQKLECSRTYKNNNQLREYQLEGMNWLLFNWYNRKNCILADEMGLG
KTIQSITFLSEIFFMGIRGPFLIIAPLSTITNWEREFRTWTEMNTVVYHGSQISRQMIHQ
YEMFYRDAQGNPIPGIFKFQVVITTFEMILADCPELKKIRWSCVIIDEAHRLKNKNCKLL
EGLKLMALEQKVLLTGTPLQNSVEELYSLLNFLEPNQFPCENTFLEEFGDLKTEEQVKKL
QSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFTFLAKGANQHNM
PNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQGAGKLVLIDKL
LPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQDINRKGNTNGVQPLSKIEVEDLLRKGAYGALMDEEDEG
SKFCEEDIDQILQRRTRTITIESEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAKIAE
LDTDGKNEKDSLVIDRPRVRKQTKHYNSFEDDELMEFSELESDTEERPTRSRRLNDKTRR
YLRAECFRVEKNLLIFGWGRWKDILTLGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKI
KSFIWDLITPTKDGYNQALQNHSGLSAPVPRGRKGKKMKSQMLLPEIKNADWLAGCNPEI
VLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGDAAAKALEGVIARDLDVLLPDIDYVE
IPVDWWDAEADKSLLVGVYKHGYERYCAMRADPALCFLEKVGMPDKNSLSADGVNDVAPD
VAERSGGEKDENNESKPESHQEAKKSPSVSNVEQVDEESNPAQDSPESDRLLWPVASSLT
ARLRRLITVYQRCNRRELSRPEILAPASHSFWLQEEMVRRAEMDPIMKEMQKRWTRREQA
DFYRTVSSFGVIYDPDKKCFNWSQFRALSRLDKKTDESLEKYFHSFVAMCRNVCRLPLRK
DDGSADPSLFLDPITEERAARTLYRIELLRKVREQVLRHPQLNERLKLCRPSLYLPVWWE
CGKHDRDLLIGTAKHGLSRTDYYIMNDPQLSFLDAYRNYSQHKRNGDENMCCHYQMASKV
YEPSAGHLERTNESEKTDAKTEIKSEAVDEPIETRMCSPQDPSCENLISQGGEIMSNSQD
ECSLPDSLMCMMYDEKTCNSSLLQASTCEQTSITSSFLGMEKSEPTDYSLSKTKEGNLTQ
EEEPVSRDCFLGSNGQECDPLEGQDRLGKPFNSNDSHLSLATEDEEQPHTQNIGEKDLKT
LNDNHFLDQTAEQSLGLELEFLDKSYEEPSGLSTEEKSCDIIGESPQSPICNLPVEEKEE
WGAELQEIKDDPIVKWQKELDDMKELPLEECVDEHKVKDLRLQNDVLKPELSCSAQVLDD
KDSMESKHKTGEMLSGLLKQNAEDLKVKDSEEEPLDCSKSLSDGNVKLEVCEIKKENIEE
ECGCKKFLEKYPEEEVKSCTLSTDKEVAQDFQDGRAPTIAQLLQEKTLYSFSEWPKDRVI
INRIDNICHSVLKGKWPSSSQQFEAQCMVPSVLNSNLCPRSSYSTAEAQNSTYSNGSPVS
HAQKETFTAAFSNDERKPRRLFEFESERADVKTRGMQHLNTQLGRNSAALNGWREAAMEL
CREQAAGGSSTYSINSSTPKMAAMTGLQGSLGMDLSGILQAGLIHPVTGQIVNGSMRREE
SSLRRRRGRRKNVEGMDLVFLKDRGMHAGIVGLREETQLGSVHTEGSVTPPSHSAATATK
TQPEKVIPNKSLLEWLRQQSDCTIDIPTYAGSFSDKPKPRRPRCKEPSKADISILTGEDR
ISGVNKDAGRRGFLPETKFSRVLSDAIVHDVGPRRRGRRPRSELIKSPGVVGSDTSSSGM
NPLFMNGLIAGMDIVGLQNMRNMQSIPLTGLVGFPTGFTTVSANEDMKSTLSMLPMMLPG
MATMPQMFGVGGIINPPISSSVPSSLGSTIKGGATHAEKATEDKDTSQESTQDSTTLEKM
VGAAFKEQAEPVVTTSSPVAFNPFLIPGMSPSLLYPSMFLSPGIGMAIPGVQSSRLSEAG
GHDPQRRRRKKVKGDSQTSESESVPLTESTEQEQPSPSGQNCVDTSETQPSEKDEDDTGL
RETPDSAN
NT seq
7947 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaaatacagaaagagccacagctacccagcctgaaagcacttagctattca
ccaatgtccagtgcctcaatatcctgcgagcgccaggtacttgccccgttttctgaatct
agccttgaggatttccaccctgtgacacttttggacaccccatctcgacttctgccagag
aatgaactgtaccctgggcaagagacttgtgaactcagctcattgaccaatctgaatgga
atagaggacagtggagggggtgggacaggtgtgaagaaaaaacggaaaaaaaaggaacag
ggggaggaaaaggagactaaaccaaagaaaaagaaggaacccaagaaagagaaggtcaaa
gaacctaagaaagtgaaggagcccaaagaggccaaggaacctaagcaacccaagaacccc
aaggaaccgaaaaagcctaggaagccgaaggagccaaaacctccgaaagaaaagaaggtg
aattctgacacggttgctaaaaccaaatctaagaaaacaagcaaagaacaggggccaact
ccagtggagaaaaagaagaaagggaagaggaaagcagaatcatgtgaagacaccctggag
ggggagctctccatgttaaactcgggatctcagagcacagaggagtccgagtctctcgac
agtcagaagagaaggtctggccgtcaggtgaagagaaggaagtataatgaagaccttgat
ttcaaagtggtggatgatgatggagaaactatcgctgtgttgggggctgggagagcatct
gcactgtctgcatctacactggcatggcaagctgaggaaccccctgaagacgatgccaac
atcattgaaaggatcctgtcttcaaaagtagttcagaaagaactcattcctggaggaatg
ccattggaggtggaggaattctttgtcaagtatagaaatttttcctatctccactgtaag
tgggcaacgctagaagatctggaaaaggatccaaggatccaacagaaaatcaagaggttt
cgaaacaagcaagcacagatgaagcatattttcactgagccagatgaagatatgtttaat
ccagactatgtggaggtggacagagtattagaagttgctcatacaaaggactctgacaca
ggagaagaggtgacgcattatctagtgaaatggtgttcactgtcttatgaagaaagcact
tgggagcttgaggaagatgttgatccaggcaaagtcaaggagtttgaaaccctgcaagtt
ctccctgacatcaatgtaacggagaggccgtcttctgaaagctggcagaagctggagtgt
tctcgtacatacaaaaataataaccaactaagggagtaccaactggagggcatgaattgg
ctcctgtttaactggtacaacaggaagaactgcattcttgcagatgagatgggccttggt
aaaactatccagtctatcacctttctctctgagattttctttatgggcattcgaggacct
tttctcattattgctccactttccacaatcacaaactgggagcgggagtttcgcacatgg
acagagatgaatactgttgtttaccatgggagccagattagccggcagatgatccaccag
tatgaaatgttctacagggatgctcagggaaatcctattccaggaatcttcaaattccag
gtggttatcacaacgtttgagatgattctagcagactgtccagaactgaagaaaatcagg
tggagctgtgtcattattgatgaagctcatcgacttaagaacaagaactgcaaacttctg
gaagggctcaaactcatggcacttgaacagaaggttcttctcaccggcaccccccttcag
aactctgtggaggagttgtacagcttgctcaactttttagaaccaaaccaatttccttgt
gaaaacacttttcttgaggaatttggagatctaaagactgaggaacaagtgaaaaaattg
cagtccattctgaagccaatgatgttaaggcgattaaaggatgatgtagagaagaacctg
gctccaaagcaggaaacaatcattgaagtggaattgaccaatattcagaaaaagtattac
cgggcaattctggagaagaattttacattcctggccaagggagccaaccagcataacatg
cctaaccttatcaatactatgatggagctgcggaaatgctgcaatcatccttatcttatc
aatggtgcagaagagaagattttggaggactttcgcaagactcacagtcccgatgcatct
gatttccaactgcaagcaatgatacaaggagcaggaaagcttgtactgattgataagcta
ttgccaaagctgattgcgggtgggcacaaagttctcatcttctcccagatggttaggtgt
ctggacatccttgaggactatctcatccagaggaggtacacatacgaacgaatagatgga
agagtaaggggcaatctccgtcaagcagccattgacagattctgtaagccagattctgac
cgttttgtattcctgctctgcactcgggcaggaggcctggggatcaacctgacggctgct
gacacctgcattatctttgattccgactggaacccccagaatgacttacaggctcaagct
cgctgtcatcgtatcgggcagagcaaagctgtgaaggtttatcgtctcataaccaggaat
tcttatgagcgggaaatgtttgataaggcgagtctaaagctgggactcgacaaggccgtg
ctacaagatatcaatagaaaaggcaacaccaatggagtacagccattgtctaaaatagaa
gttgaagatctccttaggaaaggagcatatggtgcactcatggatgaggaagatgaaggc
tctaaattttgtgaagaagacattgatcaaattctgcagcgcagaacacgaaccatcacc
atcgagtctgaaggaaaggggtctacatttgctaaggccagttttgtgtcttctggtaat
agaacagacatctcgctagatgaccctaacttctggcaaaaatgggcaaagattgcagag
ctggacacagatggcaaaaatgagaaggacagtttagtcattgaccgccctcgtgtaaga
aagcaaacgaaacactacaattcatttgaggatgacgagctaatggagttctcagagttg
gagagcgatactgaggagcgtcctacaaggtcacggcgactaaatgacaaaacgcgacgc
tatctgcgggcagaatgcttcagggtagagaagaaccttctcatatttggctggggacgc
tggaaggacatcctgacgcttggccgattcaaatggcatctaaatgaaaaagatatggag
atgatctgcagggctttgctggtttattgtgtcaaacattacaaaggagatgagaaaatc
aaaagtttcatctgggacctaattactcccacaaaggacggatacaaccaggctctgcaa
aaccactcaggtttatctgcaccagtcccacgtgggagaaaggggaagaaaatgaagagc
caaatgttgctcccagagattaaaaatgcagattggcttgctggctgcaaccctgagatt
gtcttgcatgacgacagctacaaaaagcatctgaagcagcactgcaataaggtcctcctt
cgagtgcgtatgctgtactacctcaaggcagaggttctgggagatgctgctgccaaggcc
ttagaaggtgtaattgcaagagacttggatgtcctgttacctgacatagattatgtagaa
atacctgtggactggtgggatgcagaagctgataaatcactcctagtaggagtttataag
catggttatgagcgttattgtgccatgagagcagatcctgccctctgttttctggagaaa
gtgggaatgccagataagaattcattatcagctgatggagttaatgatgtggctccagat
gtagcagagcggagcggtggggaaaaagatgagaataatgaaagtaagccagaaagtcat
caagaggccaaaaaatctcccagtgtaagcaatgtggagcaggtagatgaggagagtaat
ccagcccaggatagccctgagtcagacagattgttatggcctgttgcatcctcactgaca
gcgagacttcgtagactcattactgtgtatcagcggtgcaatcgcagggagttgtcacga
ccagagatcttagctcccgccagccacagtttttggcttcaggaagaaatggtcaggaga
gcggagatggatcctattatgaaagaaatgcagaagaggtggaccagaagagaacaagct
gacttctatcggacagtgtcctcctttggagtcatatatgatccagacaagaagtgcttc
aattggtcgcagtttagagcattgtcccgtcttgataagaagacagatgagagcctagaa
aaatatttccatagctttgtagccatgtgcagaaatgtctgtcgcctcccactcagaaag
gatgatggttcagctgatccctctctctttctggacccaataacagaagaacgtgcagca
agaaccttgtatcgtatagaacttctgagaaaggtccgagagcaagtattgaggcatcca
cagcttaatgaacgtcttaagctgtgtaggcctagtctgtatcttcctgtatggtgggaa
tgtggcaagcacgatagagaccttttaattggtacagccaaacatggactaagccgtaca
gattactatatcatgaatgatcctcagctttccttcttggatgcgtacagaaattattct
cagcataagagaaatggtgatgagaacatgtgttgccattaccaaatggcttccaaagta
tatgaaccttctgctggtcacctagaaaggacaaacgagtctgaaaagacagacgccaag
actgaaattaagtctgaagctgtggatgagccaattgaaactcgaatgtgtagccctcag
gatccttcatgtgaaaatctaatttcccaagggggcgagatcatgtccaacagccaagat
gagtgttctctacccgattcactcatgtgcatgatgtatgatgagaaaacatgtaacagc
tcacttctgcaagcaagcacctgtgaacaaacctctatcacttcaagcttcttgggcatg
gaaaaaagtgaaccaaccgactactcgctgagtaaaaccaaagaaggaaatttaactcaa
gaagaggagccggtatctagagactgctttttaggaagcaatggtcaggaatgtgatcct
ttagaaggacaagataggttaggcaaaccatttaacagcaatgatagtcatcttagttta
gctacagaggatgaagagcaaccacatacccaaaacattggagaaaaagacttgaagact
ttaaatgataatcattttcttgatcaaactgctgagcaatccttaggtctagaacttgaa
tttctagataaatcttatgaagaaccttcgggtctgagcactgaagaaaaaagctgtgat
atcattggggagagccctcaaagcccaatatgcaatcttccagtggaggaaaaagaggag
tggggggctgaactccaagaaattaaggatgacccaattgtaaaatggcagaaggagtta
gacgacatgaaggaacttccattagaagaatgtgttgatgagcacaaggtgaaagatttg
agattacaaaatgatgtcttaaagcctgagttaagttgctctgctcaagtcctagatgat
aaagactccatggagtctaaacacaagactggagaaatgctttctggcctcttaaagcaa
aatgctgaggatctgaaagtcaaagactctgaggaagaaccattagactgctccaaatct
ctttctgatggaaatgtgaaattggaggtctgtgaaattaagaaggagaatattgaggag
gaatgtggttgtaagaagttccttgagaagtatccagaagaggaagtgaagagttgcaca
ctatccaccgataaggaagtagcacaggattttcaagatggcagagctccaactatcgct
cagctgctgcaggagaaaaccttgtactcattttccgagtggcctaaggatcgagtgatc
attaatcggatagacaatatttgccattcggtgctgaaggggaaatggccatcctccagt
caacagtttgaagcacagtgcatggtaccctcagtgttaaatagcaatttgtgtccaagg
agcagctacagcactgcagaagcacaaaattcaacctatagcaatggctctcctgtgtcg
catgcgcagaaggaaaccttcactgctgcattttcaaatgacgaacgaaaacctcgaagg
ctatttgagtttgaaagtgagagggcagatgtgaagacccgagggatgcaacatctcaat
actcagcttgggagaaacagcgcagcattgaatggatggagagaggccgccatggaactt
tgtagagagcaggctgcaggcggcagctctacctattctatcaatagcagcacgcccaag
atggctgccatgactggcttgcagggttctttgggaatggacttgtcaggaatcttgcag
gctggactcatccatcctgtcacaggacaaattgttaatggcagcatgaggagagaggag
tcttccctccgaaggagaagaggaagaaggaaaaatgtggaggggatggatctggtgttt
ctgaaagacagagggatgcacgcaggaattgtggggctacgtgaggaaactcaacttggc
tcagtgcacactgaaggctctgtcactcctccttcacattctgccgctacagccactaag
acccaacccgagaaggtgatccctaacaaaagcctcctggagtggctgcgccagcagtca
gactgcacaatagacataccgacatacgcaggtagtttttcagataaacccaaaccgagg
cgcccgcggtgcaaggagcctagtaaagcggacattagcattctcactggtgaagacagg
atctctggtgttaacaaagacgcggggcgaaggggatttcttcccgaaacaaagttcagc
agggtattgtcagatgctattgtacatgacgtagggccgaggaggagaggaagaagaccg
cgaagtgaactgatcaagtccccaggagtggtgggatctgatacatcatcttctggcatg
aatccactttttatgaacggcctaatcgctggaatggatatagtgggattgcaaaacatg
agaaatatgcagagtattccactgacggggctggtggggttccctactggatttacaaca
gtatctgccaacgaggacatgaaaagcacgttaagtatgttacccatgatgctcccgggt
atggctaccatgccacagatgtttggcgttggggggatcattaaccctcccatctcatcc
tctgtgccatcatctttaggaagcacaataaaaggtggtgccactcatgcagagaaagcc
actgaggacaaagacaccagccaagaaagtacacaagattccacaactttagagaaaatg
gtgggtgccgctttcaaagagcaggcagaacctgtagtgactacaagcagccctgtagct
tttaacccattccttatcccaggcatgtctccaagtctactgtacccttctatgtttctg
tcgccaggcattggcatggccataccaggggtgcagtctagccgtttatcagaggcaggg
ggccatgatccacaaaggaggaggagaaagaaagtaaagggggactctcagacttcagaa
tcagagtctgtgcccttgactgagtccacagagcaggagcagccgtctcccagtggccag
aactgtgtagataccagtgaaacacaaccatcagagaaggacgaggacgatactggttta
agagaaactccagacagtgctaattag
DBGET
integrated database retrieval system
