Bdellovibrio bacteriovorus W: BDW_13805
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Entry
BDW_13805 CDS
T03036
Name
(GenBank) primosomal replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bbw
Bdellovibrio bacteriovorus W
Pathway
bbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BDW_13805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbw03400
]
BDW_13805
Enzymes [BR:
bbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BDW_13805
DNA repair and recombination proteins [BR:
bbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BDW_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_22
Helicase_C_2
AAA_19
DUF87
TrwB_AAD_bind
DUF6154
AAA_16
Oxidored_nitro
AAA_30
zinc-ribbons_6
DUF4485
Motif
Other DBs
NCBI-ProteinID:
AHI07261
LinkDB
All DBs
Position
2891245..2893284
Genome browser
AA seq
679 aa
AA seq
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MSSHSLWRVAVEAPLFDSLTYSSDLPLQRGQAVVVPLGKRKANGVVLDATTEVPNFEVRS
VDSIIEDYAPLPETYVRWIEWLAQYYMHPVGQVAQSSFPPLKKATKERKSSRPPVIPELS
ADTALHMTEEQDACFQAISKHQEFSTHLVFGVTGSGKTEIYLRLLEETLKSGKRGLVLVP
EISLTPQLIQRFARRFGDKIAALHSQLTDRERTNQWWDIVDNKKSILIGARSALFCPIKD
LGLIIVDEEHETSFKQDEKLKYNGRDAAVMLAKMMNCPIVLGSATPSLETWKNAVEGKYF
LHTLKKRVANRSLPTVEVVDLRQNKDDDEEKKRINSSHSFLPFWLSTELYENMKRTLEKG
DQAALFLNRRGVAQMVLCPGCGYTCECPNCDISLTLHGRTHLVCHYCDYHENLKEQCPEC
KEGELKPIGLGTELLEQDLSKLFPDKRVARADRDEIQSREDLEDLISDMETGEIDILVGT
QMIAKGLDFPKLKLVGLVLADVGFNLPDFRATERSFQLMTQMSGRSGRHVQEGEDPGKVF
IQTFNIHHESVIYAQTHDFEGFAKNELVTREQLAYPPYGKMISLRIQGIHLNKVEEATRL
LSRRAHALKGQFAQYEGIDILGPAEAPIAKLRNQYRFHLLIKSRQPQLANPFTRQLLGNQ
DWIPSGVKILVDVDPMSLL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcactctctttggagagtcgctgttgaagctccgttattcgattccctaact
tatagctctgatcttccactacaaagaggacaagctgttgttgtacctcttggtaaacgc
aaagctaatggagttgtattagacgcaaccacagaggtgcccaattttgaagtgcgctct
gttgattctatcattgaagattatgctccactgccagaaacatacgtccgctggattgag
tggctcgctcaatattatatgcaccccgtaggacaagttgcacagtcttcatttccgccg
ctaaaaaaagcgacgaaagagcgaaaatcctctcgtcctccagtcatcccagagttgagc
gccgacacggctttacatatgactgaagagcaagatgcttgcttccaagccatttcaaaa
catcaagaattttcaactcaccttgtttttggagtgaccggatctggaaagactgaaatc
tacttacgccttcttgaagaaacactgaagtcaggcaagcgaggacttgtccttgtacct
gagatttcattaacacctcagctcatccaacggttcgctcgtcgcttcggagacaagatt
gcagccctgcactctcaactcacagatcgcgaaagaaccaatcaatggtgggatattgtc
gataataaaaagtctattcttatcggcgcacgctctgcactcttctgtccgattaaagat
ttgggcctaatcattgtcgacgaagagcacgaaactagcttcaaacaagacgaaaaacta
aaatataacggacgtgatgccgctgtgatgctggccaagatgatgaactgcccaattgtt
ttgggttcggccacgcccagtttagaaacatggaagaatgctgttgaaggaaagtatttt
cttcacaccttaaaaaaacgtgtcgccaatcgctctctacccacagttgaagttgtcgat
ttaagacaaaacaaagatgatgacgaggaaaaaaagagaattaactctagtcattcattc
ctcccattttggttgagcactgaactctatgagaatatgaagcgcactctagaaaaagga
gatcaggcagccctttttctcaatcgcagaggcgttgcacagatggttctctgccctgga
tgtggctacacatgcgagtgccctaactgcgatatctcattaactctgcatgggcgtact
catcttgtatgtcactactgtgattaccatgaaaatctaaaggagcaatgtcctgagtgt
aaagagggggaacttaagcctattggcctcggcacggaactcttagaacaagatctttca
aaactttttccagataaaagagtcgcaagagccgatcgagacgaaatccaatcacgtgaa
gatctagaggatttaatctctgacatggagaccggtgagattgatattctcgttggcact
cagatgattgctaaagggttggactttccaaagcttaaacttgtgggcctagtccttgcg
gatgttggctttaaccttcccgactttcgcgccacagaaagaagctttcagctaatgact
caaatgagtgggcgaagtggccgccacgtccaagaaggtgaagacccaggaaaggttttc
atccaaacttttaatattcatcatgagagcgttatctatgctcagacccacgactttgaa
ggatttgcaaaaaatgaactcgtcacaagagagcaactggcttacccaccttatgggaag
atgatcagcctgcgcattcaaggtatccacctcaataaagtcgaggaagcaactcgactc
ttgtcgcgacgagctcatgccttaaaggggcagtttgctcaatatgagggaatcgatatt
ttaggtcctgctgaggctccgatcgctaagctccgcaaccagtaccgctttcacttacta
ataaagtcgagacagcctcaactggccaatccttttacccgtcagcttcttggaaaccaa
gactggattccttcgggcgtaaaaattttggtcgacgttgatccaatgagtttgctttaa
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