KEGG   Paraburkholderia caribensis: K788_0001212
Entry
K788_0001212      CDS       T04141                                 
Name
(GenBank) Type III secretion inner membrane channel protein
  KO
K03230  type III secretion protein V
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K788_0001212
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bcai02044]
    K788_0001212
Secretion system [BR:bcai02044]
 Type III secretion system
  Type III secretion core apparatus
   K788_0001212
SSDB
Motif
Pfam: FHIPEP SpoIIM
Other DBs
NCBI-ProteinID: ALL70451
UniProt: A0A0P0RNE2
LinkDB
Position
unnamed:1117851..1119935
AA seq 694 aa
MLKTLKLPAGGEIGILVMIVAIVSLMILPLPFFMIDILVGLNIATAVTLLMITLYVPSVV
SLSAFPSILLFTTLYRLSLSIASTKSILLHAEAGDIIDSFGKLVVGGNLVVGMVVFIIIT
LVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRANLLTADEARHKRATLALESAL
HGGMDGAMKFVKGDAVAGLIITMINIVAGLAVGVLYHGMTAGEAANRFSILSVGDAMVAQ
LPALLLSVAAGVMITRVADDRDEKPRSLGAEIGKQLMGSAPALGFAALLLVAFAAVPGFP
WPLFLVLGGILGFTAWKLKKRGSSRAFEDLEAVRSMQRAGAKSETPAISSVPPAFSCALG
VRLAPDLRGRLAVERLNHAFETERTSLQEELGLPFPGIHMWISEKLAPSTCEFLMHDVPS
FTLELPQGKVLLADLPQRLAAQPDDTQAQALAERCEQREPIDGTAQPSYWHDETTLADKT
SGWRAEQVIAHVSVQLLRRNASLFLGVNEVQWIQEQLGIEYPGLLAEVQKVLPPQRIADV
LRRLLEEQIPIRNIRNIMESLIAWGPKEKDVLMLTEYVRGDLARFLAHRAALGARVLPAI
LLDAPVEQHIRQAIKQTPTGNYLALPPDQINFLVDSIESFAGLAPRPGIALVTSMDIRRY
VRRMIEGRLGWLSVYSYQELGGHLELQPIGHVTA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgctcaagacactcaaactccccgccggcggcgagatcggcatcctcgtgatgatcgtc
gcgatcgtctcgctgatgatcctgccgctgccgttcttcatgatcgacatcctcgtcggc
ctgaacatcgcgacggccgtcacgctgctgatgatcacgctctatgtgccgagtgtcgtc
tcactgtccgcgttcccgtcgatcctgctgttcaccacgctctaccggctgtcgctcagc
atcgcgtcgaccaagtcgatcctgttgcatgcggaagcgggcgatatcatcgacagcttc
ggcaagctcgtggtgggcggcaatctggtggtcggcatggtggtgttcatcatcatcacg
ctggtgcagttcatcgtgatcgcgaaaggctcggagcgggtcgcggaagtcggcgcgcgc
ttcacgctcgacgcgatgcccggcaagcagatgagcatcgacgccgacctgcgcgccaat
ctgctgaccgccgacgaagcccgccacaagcgcgccacgctcgcgctggaaagcgcgctg
cacggcggcatggacggcgcgatgaagttcgtcaagggcgacgccgtcgccggcctcatc
atcacaatgatcaacatcgtcgcggggctggccgtcggcgtgctgtatcacggcatgacg
gcgggcgaagcggccaaccgcttttcgatcctctcggtcggcgacgcgatggtcgcgcag
ttgcccgcgctgctgctgtcggttgcggcgggcgtgatgatcacgcgcgtagccgacgac
cgcgacgagaaaccgcgctcgctcggcgcggagatcggcaagcagctgatgggcagcgcg
cccgcgctcggcttcgcggcgctgctgctggttgcgttcgccgccgtgcctggctttccg
tggccactctttctggtgttgggcggcatcctcggcttcactgcatggaagctgaaaaag
cgcggttcatcacgcgccttcgaagacctcgaagccgtgcgctcgatgcagcgtgccggt
gcgaagagcgaaacgcccgccatttccagcgtgccccccgcgttctcctgcgcactcggc
gtgcgccttgcgccggacttgcgcggccgcctcgccgtcgagcggctcaatcacgccttc
gaaaccgaacgcacatcgttgcaggaagaactcggcttgccgtttcccggcattcacatg
tggatcagcgagaagctcgcgccgtccacctgcgaattcctgatgcacgacgtgccgtcg
ttcacgctcgaactgccgcaaggcaaggtcctgctcgccgacctgccgcaacggctcgcc
gcgcagcccgacgacacgcaggcgcaagcgctcgccgaacgttgcgaacaacgcgaaccg
atcgacggcacggcgcagccgagctactggcacgacgagaccacgctcgccgacaagacc
agcggttggcgcgccgagcaggtcatcgcgcatgtgagcgtgcagttgctcaggcgcaat
gcgtcgctctttctcggcgtcaatgaagtgcagtggattcaggaacagctcggcatcgag
tatccgggcctgctcgccgaagtgcagaaggtgctgccgccgcagcgcatcgccgacgtg
ctgcggcgtctgctcgaagaacagatcccgatccgcaatatccgcaacatcatggaaagc
ctcattgcgtggggaccaaaagagaaagacgtgctgatgctgaccgagtacgtgcgcggc
gatctcgcgcgctttctcgcgcaccgggccgcgctcggcgcccgcgttctgcccgcgatc
ctgctcgatgcgcccgtcgaacagcatattcgccaggcgatcaagcagacgccgacgggc
aattacctcgcactgccgccggaccagatcaactttctggtcgacagcatcgaatcgttc
gcggggctggcgccgcgtcccggcatcgcgctcgtcacgtcgatggatatccggcgctac
gtgcggcgcatgatcgaaggacggctcggctggctctccgtctattcgtatcaggaactg
ggcggacatctcgaactgcagccgatcggccacgtgacggcctga

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