Paraburkholderia caribensis: K788_0006908
Help
Entry
K788_0006908 CDS
T04141
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03030
DNA replication
bcai03430
Mismatch repair
bcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K788_0006908
03430 Mismatch repair
K788_0006908
03440 Homologous recombination
K788_0006908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcai03032
]
K788_0006908
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0006908
Enzymes [BR:
bcai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K788_0006908
DNA replication proteins [BR:
bcai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K788_0006908
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K788_0006908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ALL64074
UniProt:
A0A0P0R7Y9
LinkDB
All DBs
Position
1:1366438..1367562
Genome browser
AA seq
374 aa
AA seq
DB search
MQLRLDALEAHLAKGPAGLYVVYGDEHLLAQEACDRIRATARANGFTDRTVFTVERGFDW
SSLLGASQSMSLFGDRQLVELRIPTGKPGKEGADALKTLAASANPDVLTLITLPRLDAAT
QKAAWFTALADAGVALKIDPVERAQLPGWVGQRLAQQGQRVAPGEEGKRALQFIAERVEG
NLLAAHQEIQKLGLLYPSGALSFEQVHDAVLNVARYDVFKLNEAMLAGDVGRLSRMIDGL
KGEGEAAVLVLWAVVEEIRTLLRIKRGVEAGKPLPMLLRENRVWGPRERLVGPALSRVTE
ASLEKALALAAKLDRQVKGLSGGTPGNHRNDPPPDPWAGLFELAMAVAGASAAPVRGVPN
RPAPARSAPMRRPS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgtcttgacgcgctcgaagcgcatctcgcgaaaggtcccgccggtctgtac
gtcgtgtacggcgacgagcatctgctcgcgcaggaagcgtgcgaccgcatccgcgcgacg
gcgcgcgcgaacggctttaccgaccgcacggtgttcacggtggaacgcgggttcgactgg
agttcgctgctcggcgcgagccagtcgatgtcgctgttcggcgaccgccagctggtcgaa
ttgcgtattccgacgggcaagcccggcaaggaaggcgcggacgcgctgaagacattggcc
gcgtcggcgaatcccgacgtgctcactctgatcacgttgccgcgtctcgacgcggcgacg
caaaaggctgcgtggttcactgcgctggccgacgcgggcgtcgcgctgaagatcgatccc
gtcgagcgtgctcaattgccgggttgggtcgggcaacgtcttgcgcagcaagggcaacgc
gttgcgcccggcgaagagggcaagcgcgcgctgcaattcattgcggaacgcgtcgaaggc
aatctgctcgccgcgcatcaggagatccagaagctcgggctgctgtatccgtcgggggcg
ctgtcgttcgaacaggttcacgacgcggtgctcaacgtcgcgcgctacgacgtgttcaag
ctcaacgaagcgatgcttgcgggcgacgtcggtcgtctgtcgcggatgatcgacggcctg
aagggcgaaggcgaagcggccgtgctcgtgctgtgggccgtcgtcgaagagattcgcacg
ctgttgcgcatcaagcgcggtgtcgaggcgggcaagcctctgccgatgctgctgcgcgaa
aaccgcgtgtgggggccgcgcgagcggctcgtcgggccggcgctgtcgcgtgtcaccgag
gcttcgctggaaaaagcgctggcgttggcggcgaagctcgatcggcaggtgaaggggttg
tcgggcggcacgccgggcaatcatcgtaacgatccgccgcccgatccgtgggccggactg
ttcgaactcgcaatggccgtggctggcgcatccgctgctcccgtgcgtggcgtgccgaac
cggccagcgccagcgcgatcggcgccaatgcgccgaccgtcgtag
DBGET
integrated database retrieval system
