Bradyrhizobium canariense: BcanWSM471_17985
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Entry
BcanWSM471_17985 CDS
T08760
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcan03016
]
BcanWSM471_17985 (rnd)
Enzymes [BR:
bcan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BcanWSM471_17985 (rnd)
Transfer RNA biogenesis [BR:
bcan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BcanWSM471_17985 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UFW38148
LinkDB
All DBs
Position
complement(3938605..3939756)
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AA seq
383 aa
AA seq
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MDLITTTADLAAACSRLAKHPVITVDTEFLRETTYYPLLCVVQMASAEEAIVIDTLAAGI
DLKPFFELMANEAVLKVFHAARQDIEIIWHQANIIPHPVFDTQVAAMVLGYGDSIAYDAL
VEKVTGHRPDKTHRFTDWSRRPLTKEQMHYAVSDVTHLRDVFAALDADLKKRRRSEWVSI
EMEVLTSPKTYDFHPERAWERLKTRVRKPKDLAVLMEVAAWREQEAQSRDVPRGRVLRDE
AVSDIATHAPNTIEKLANLRSVPKGFEKSKWGADIVAAVERGLARDHATLPKLEKPRNNN
NGAAIVELLKVLLRMTAERHAVASKVIATVDDLEEIAADDEADVPALRGWRRELFGEAAL
KLKRGELALAVEKGRVIGVQRAE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggatttgattaccaccaccgctgaccttgcggctgcctgcagccggttggccaagcac
cccgtcattaccgtcgataccgagttcctgcgcgagaccacctattacccgctgctgtgc
gtggtgcagatggccagcgccgaggaagcgatcgtcatcgacaccctggccgcgggcatc
gacctcaagccgttcttcgagctgatggccaatgaggctgtactgaaggtcttccacgcc
gcccgccaggacatcgagatcatctggcaccaggccaacatcattccgcacccggtgttc
gacacccaggtcgcggccatggtgctcggctacggcgacagcatcgcctacgacgcgctg
gtcgagaaggtcaccggacaccgcccggacaaaacccaccgcttcaccgattggtcgcgc
cggccgctgaccaaggagcagatgcattacgccgtgtccgacgtcacgcatctgcgcgac
gtgttcgcagcgctcgatgccgacctcaagaagcgccggcgcagcgaatgggtctcgatc
gagatggaggtcctgacctcgcccaagacctacgacttccaccccgagcgcgcctgggaa
cggctcaagacgcgggtgcgcaagcccaaggacctcgcggtcctgatggaggtcgccgcc
tggcgcgagcaggaggcgcagagccgcgatgtgccgcgcggccgcgtgctgcgcgacgag
gccgtcagcgacatcgcaacccacgcgccgaatacgatcgagaagctcgcaaacctgcgc
tcggtgccgaagggttttgagaaatccaaatggggcgccgacatcgtcgccgccgtcgag
cgcgggctggcgcgcgatcacgccacgctgccgaagctggaaaagccgcgcaacaacaac
aatggcgccgcgatcgtcgagctgttgaaggtgctgctgcgcatgaccgcggagcgccat
gcggtcgccagcaaggtgattgcgaccgtcgacgatctcgaggagatcgcggccgacgac
gaggccgacgtgccggcgctacgcggctggcgccgcgagctgttcggcgaggccgccctg
aaactgaagcgcggcgagctggcgctggcggtcgagaaaggccgcgtgatcggggttcag
cgggcggaatag
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