Buchnera aphidicola BCc: BCc_019 Help Entry BCc_019           CDS       T00423                                  Symbol rpoB Name (GenBank) RNA polymerase, b subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism bcc  Buchnera aphidicola BCc Pathway bcc03020   RNA polymerase Brite KEGG Orthology (KO) [BR:bcc00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     BCc_019 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bcc03021]     BCc_019 (rpoB)    03400 DNA repair and recombination proteins [BR:bcc03400]     BCc_019 (rpoB) Enzymes [BR:bcc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      BCc_019 (rpoB) Transcription machinery [BR:bcc03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      BCc_019 (rpoB) DNA repair and recombination proteins [BR:bcc03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       BCc_019 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 Motif Other DBs NCBI-ProteinID:  ABJ90504 UniProt:  Q058E5 LinkDB All DBs Position complement(24138..28169) Genome browser AA seq 1343 aa AA seqDB search MIYSYTEKKRIRENFGKQPKILDIPYLLSIQIDSFKKFIEPKKNNYQGLESAFQSIFPIR SYNGCAELQYVSYTLGKKLFDMYESKTRGTTYSVPLRVKLQLIIYEKDSKNTNVKHIKEQ EVYMGELPLMTHNGTFIINGTERVVVSQLHRSPGVFFDSDKGKTHSSGKILYNARIIPYR GSWLDVEFDPKDHLFIRIDRRRKIPATVLLHALNFSTEKILKIFFKHDIFYIKNKNIYMY LIPKRLKGEIIPFEIIKNKKRYIKKGERITTEHIKKLKKKKIKTIQIPEEYLYGKTISKN YYHPKTKEILIKSNTTLTQDEFNKIKNFNNKKFYVLFTNNIDNGAYISETLKIDTTKDRL TALIEIYKIMRPGEPPTKEAAENLFNNLFFSQERYDLSPVGRMKFNKSLKRKEKKGSGIL NKEDIIDVIKKLINIKNGKGEIDDIDHLSNRRVRSVGEMVENQFRIGLVRVERAVRERLS LSDLDTLMPQDIINAKPISSAIKEFFGSSQLSQFMDQNNPLAEITHKRRISALGIGGLTR ERAGFEVRDVHPTHYGRVCPVETPEGPNIGLINSLSIYARTNQYGFLETPYRKVKNGTVT TKIKYLSAIEEGNYIIAQANTKINKFGKFYKKFVTCRYNGEFGLFKNKKVNYMDISTQQI VSVGASLIPFLEHDDANRALMGANMQRQAVPTIKSEKPLVGTGMERSVAIDSGVTIIAKR SGKIEYVDASRIVVRIKDEKIRTYESGIDIYNLTKYSRSNQNTCINQIPCINLNDSIKKG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILISEKVEREDKFTTIHIQELSCIC RDTKLGIEEITSDIPNIGESALSKLDTSGIIYIGADVSSGDVLVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGTNGTVIDVQIFTRDGVKKDKRTIEIEEMLLKKAKKDL TEELKIFELNIINRINKILLTLKTKINCIVANSLNEYFKKKIKYPKKIKKKIHTLKIQYK QLQKKFKKKIKEKTKKIIQGDELAPGILKIVKIFLAVKRKIQPGDKMAGRHGNKGVVSKI NPVEDMPYDNNGEPIDIVLNPLGVPSRMNLGQILETHLGLAAKGIGNIINRMLKTNKKIY KIRKFLQKVYNLGENINQKINLDNFSDIEILQLAKNLRIGLPIATPVFDGVNEKEIKKLL KMSNFSTSGQITLFDGRTGEKFERNVTVGYMYMLKLNHLVDDKMHARSTGSYSLITQQPL GGKAQFGGQRFGEMEVWALEAYGASHTLQEMLTVKSDDVTGRTKMYKNIVSGKHNMEPGM PESFNVLVKEIRSLGINIELNNN NT seq 4032 nt NT seq  +upstreamnt  +downstreamnt atgatttattcttatactgaaaaaaaacgtattcgtgaaaattttggaaaacaaccaaaa attttagatattccttacttattatctattcaaatagattcatttaaaaaatttattgaa ccaaaaaaaaacaattatcaaggattagaatctgcttttcaatcaatttttcctatacgt agttataacggatgtgctgaactacaatatgtatcatatacattaggaaaaaaattattt gatatgtatgaatcaaaaactagaggaactacatattctgttccattaagagtaaaatta caactaattatttatgaaaaagattcaaaaaatacaaacgtaaaacacattaaagaacaa gaagtatatatgggtgaattaccattaatgacacataatggtacatttattattaatggt actgaaagagtcgtagtatcacaattacatagaagtccgggtgttttttttgatagtgac aaaggaaaaacacattcttcaggaaaaatattatacaacgcaagaattattccttatcga ggatcttggctagatgttgaatttgatcctaaagatcatttatttatacgaatagatcgt cgtagaaaaataccagctactgtattattacatgctttaaattttagtacagaaaaaatt ttaaaaatattttttaaacatgatattttttatattaaaaataaaaatatttatatgtat ttaattcctaaacgattaaaaggagaaatcattccatttgaaattataaaaaacaaaaaa agatatataaaaaaaggagaaagaataacaacagaacatataaaaaaactaaagaaaaaa aaaatcaaaacaattcaaattcctgaagaatatttatatggaaaaactataagtaaaaat tattaccatccaaaaacaaaagaaatattaataaaatcaaatacaacattaacacaagat gaatttaataaaattaaaaattttaataacaaaaaattttatgtattatttactaataat attgataacggagcgtatatttcagaaaccttaaaaattgatacaactaaagatcgatta acagcattaattgaaatatataaaattatgcgaccaggagaaccacctactaaagaagcc gcagaaaatttatttaataatctttttttttctcaggaaagatatgatctttctcctgtt ggacgaatgaaatttaataaatctcttaaaagaaaagaaaaaaaaggatcaggaatatta aataaagaagatattatagatgtaattaaaaaattaattaatattaaaaatggaaaagga gaaattgatgatattgatcacttaagtaatagaagagtaagatcagttggggaaatggtt gaaaatcaatttagaattggattagttagggtagaaagagctgtacgtgaaagactatct ctgagtgatttagacacactaatgcctcaagatattattaatgctaaacccatttcttct gctataaaagaattttttggatctagtcaattatctcaatttatggatcaaaacaatcca ttagcagaaattacacataaacgtagaatttctgcattaggaataggaggattaactaga gaacgagcaggttttgaagtacgagatgtgcatcctacacattatggtagagtatgtcca gtagaaacaccagaaggaccaaatattggtttaattaattctttatctatatatgcgaga acaaatcagtatggttttttagaaactccatatagaaaagtaaaaaatggtacagtcaca acaaaaattaaatatttatcagctattgaagaaggtaattatattattgctcaagctaat actaaaattaataaatttggaaaattttataaaaaatttgttacatgtagatataatgga gaatttggtttatttaaaaataaaaaagtaaattatatggatatatcgacacaacaaatc gtttcagtaggagcatctttaataccatttttagaacatgatgatgcaaatagagcatta atgggtgcaaatatgcaaagacaagcagttcctacaataaaatcagaaaaaccattagta ggtacaggaatggaaagatctgtagctattgattctggtgtaacaattattgctaaaaga agtggaaaaattgaatatgttgatgcttcacgtattgttgtacgaattaaagatgaaaaa attcgtacttatgaatcaggaatagatatatataatcttacaaaatattcaagatctaat caaaatacttgtattaatcaaattccatgtattaatttaaatgattctattaaaaaaggt gatgttttagctgacggaccttcaactgatttaggagaattagcacttggacaaaatatg cgcgttgcatttatgccttggaatggatacaattttgaagattcaatattaatttcagaa aaagtagaaagagaagataaatttactacaattcatattcaagaattatcttgtatttgc agagatacaaaacttggaatagaagaaattacatcagatatacctaatattggagaatca gcattatctaaattagatacttcgggaattatatatataggtgctgacgtatctagtggt gatgttctagtaggaaaagttaccccaaaaggagaaactcagttaactcctgaagaaaaa ttattaagagcaatttttggagaaaaagcttctgatgtaaaagattcctctctacgtgtt ccaaacggaactaatggaactgtgatcgatgtacaaatatttactagagatggagtaaaa aaagacaaacgcacaatagaaatagaagaaatgctattaaaaaaagcaaaaaaagattta acagaagaattaaaaatttttgaattaaatattatcaatcgaataaacaaaatattactt acattaaaaacaaaaataaattgtattgtagctaattctttaaatgaatattttaaaaaa aaaataaaatatccaaaaaaaatcaaaaaaaaaattcatacattaaaaatacaatataaa caactacaaaaaaaatttaaaaaaaaaattaaagaaaaaactaaaaaaataatacaaggt gacgaattagctccaggaattttaaaaattgtaaaaatttttctagctgtaaaacgaaaa atacaaccaggtgataaaatggctggtcgacacggaaataaaggagttgtatcaaaaata aatcctgttgaagacatgccttatgataataatggtgaacctattgatattgtattaaat cctctaggtgtaccttcacgtatgaatttaggtcaaattcttgaaacacatttaggatta gcagcaaaaggtattggaaatataattaatagaatgctaaaaacaaataaaaaaatatat aaaatccgtaaatttttacaaaaagtatataatcttggtgaaaatataaatcaaaaaatt aatttagataatttttctgatatagaaatattacaattagcaaaaaatttacgtatagga ttacctattgctacaccagtttttgatggtgttaatgaaaaagaaataaaaaaattatta aaaatgagtaatttttctacttctggacagattacattattcgatggtagaacaggtgaa aaatttgaaagaaatgttaccgttggatacatgtatatgttaaaactaaaccatttagta gatgataaaatgcatgctcgatctactggatcatatagtttaattacacaacaaccgctg ggtgggaaagcacagtttggtgggcaaagatttggagaaatggaagtatgggctttagaa gcatacggagcgtcacatactttacaagaaatgttaactgtaaaatcagatgatgtaact ggaagaactaaaatgtataaaaacattgttagtggaaaacataatatggaaccaggtatg ccagaatcttttaatgttttagtaaaagaaatacgttctttaggaataaatattgaatta aacaataattaa

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