Niallia circulans: C2I06_07525 Help Entry C2I06_07525       CDS       T06357                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism bcir  Niallia circulans Pathway bcir03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:bcir00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     C2I06_07525 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bcir03400]     C2I06_07525 (ligD) Enzymes [BR:bcir01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      C2I06_07525 (ligD) DNA repair and recombination proteins [BR:bcir03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      C2I06_07525 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  AYV66736 UniProt:  A0A3G4Z722 LinkDB All DBs Position 1581335..1582564 Genome browser AA seq 409 aa AA seqDB search MHKAAFFISNYHKKTDSFGVSVIGNENIIPVGSFQNGLKRAEKTALLQIIKEHAIKEDDN FYFLDPGICVELQFSSFQQHRLNNPVFIQFLYNKDWKDCTLENVIATESTPITHADKPLF PNTKITKLDYILYLKEVSPYLLPFLENRLLTTIRFPHGLFGESFYQKQCPDYAPSYVETY KNEDIEYIVCNNVETLMWLGNQLAFEFHIPFETIYSNSMPSEIVFDLDPPSVEHFYMAIK AAKVLQQILERLQLLSFVKISGNKGIQVYLPLPERTFTYEKVRLFTEFIANYMIEENPEL FTIERLKKNRRNRLYIDYIQHSEGKTIIAPYSIRGNKGGYVACPIAWDELTEDLHPSQFS MDVVLQRLQNGIHSFAGYFEAKEKQPFQQVLDVLTNIQNEEGTGKHLNR NT seq 1230 nt NT seq  +upstreamnt  +downstreamnt atgcataaagctgcattttttattagtaattatcataaaaaaacagactcatttggtgtc agcgtcattggaaatgagaacataatccctgtaggctcttttcaaaatggcttaaaaaga gcagaaaaaacagcattattacagattataaaagaacatgctataaaggaagatgacaac ttttattttctagatcccggaatttgcgtagaattacagttttcctcttttcaacagcat agactaaacaatcctgtttttatccaatttttatataataaagattggaaagactgtaca ttagagaatgttatcgcaacagagtctacgcctattactcatgctgataaacctcttttt cccaataccaagattacgaaacttgattatattttatatttaaaagaagtcagtccatat ttacttccttttttagaaaatcgcttattgactacaattcgatttccccatggtttattt ggcgaatctttctatcaaaaacaatgtccagactacgctccttcttatgtggaaacatat aaaaacgaagacatagaatatattgtttgtaataatgtagaaacgcttatgtggctcgga aatcaattagcgtttgaatttcacattccttttgaaacaatttattctaatagcatgcct tctgaaattgtctttgatctagacccgccttctgtggaacatttttatatggctattaaa gctgcaaaagttctgcaacagattttggaacgattacagcttttatcttttgtgaaaata tcaggaaataaaggaattcaggtgtatttaccacttccagaaagaacatttacttatgaa aaagtacgtttattcacagaatttattgctaattatatgattgaggaaaatccagagctt ttcaccatagaacgattaaagaaaaaccgcagaaacagattatacattgactacatccaa catagtgaaggaaaaacaattatcgctccctattccattcgcggtaataaaggcggatat gttgcatgcccaattgcatgggatgaattaacagaagatcttcatcctagtcaattttca atggatgttgtattacaaagacttcaaaatgggattcattctttcgctggttattttgag gcaaaagaaaaacaacctttccagcaagtactagatgtgttaacaaatatacaaaacgag gaagggacaggaaaacatctaaatagataa

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