Heyndrickxia coagulans 2-6: BCO26_1212
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Entry
BCO26_1212 CDS
T01527
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bck
Heyndrickxia coagulans 2-6
Pathway
bck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCO26_1212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bck03019
]
BCO26_1212
Messenger RNA biogenesis [BR:
bck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCO26_1212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Exonuc_VII_L
UPF0154
Motif
Other DBs
NCBI-ProteinID:
AEH53271
UniProt:
F7Z492
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All DBs
Position
1265752..1267314
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AA seq
520 aa
AA seq
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MESLIWIISLLLVLIVGVVVGYFIRRSIYEAKIAGAKNAADQIVDEAKREADRLKKEALL
EAKDENHKLRTDMERELRERRNELQRQENRLLQKEENLDRKDESLDKRESMLEQKEDSLN
LRQQHIEEMESKLEEMVNEQESELERISGLNREQAKAIIIEKLENELSHDIAVKVKEAET
RAKEEADKKAKSILSLAIQRCAAEHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRRETARIALEKLVQDGRIHPARIEEMVEKARREVDEHIR
EVGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSIEVAFLSGLLAAELGEDEIL
ARRAGLLHDIGKAVDHEVEGSHVQIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLEHYIRRLEKLEEIAESYEGVEKSFAIQAGREVRIMVKPEQID
DLEAHRLARDIRKKIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctcatatggatcatctcccttttgcttgtccttatcgtcggtgtagttgtt
ggctatttcatccggagatcaatttatgaagcaaaaattgcaggggcgaaaaatgcggcg
gatcagatcgtcgatgaagcaaaacgcgaagctgaccgcctgaaaaaagaagccctgctt
gaagcgaaggatgaaaatcataaacttcgtacggatatggaacgggaattgcgtgaacga
agaaatgaattgcaaagacaggaaaaccgcttattgcaaaaggaagagaacctcgaccgc
aaagatgaatcgctcgataagcgtgaatcgatgcttgaacagaaagaggattctttaaac
ctgagacaacaacatattgaagagatggaaagcaaattggaggagatggttaacgagcag
gagtctgagctggaaagaatctcgggcctcaatcgcgaacaggcgaaagccatcattatt
gaaaaactggaaaacgagctttcccatgacattgccgttaaggtaaaggaagcggaaaca
agggcaaaagaagaagccgacaaaaaggcgaaaagcattctttcgctagccattcagcgg
tgtgcagccgagcatgttgctgaaacaacggtatcggttgtcaatttgccgaatgatgaa
atgaaaggccgcatcatcggaagggaagggcgcaatatccggacgcttgaaacgctgacc
gggattgacctgatcatcgatgatacgccggaagcggtgattctttcgggattcgatccg
gtgcgccgggaaacggcacgcattgcactggaaaaactggttcaagacggccgcatccat
ccggcccgcattgaagaaatggttgaaaaagcaaggcgggaagtggatgaacatatacgc
gaagtgggggaacaaaccacttttgaagtcggtgtccatggccttcatccggacttaatc
aagattcttggccggttaaaattccgcacgagctacgggcaaaatgtcctcaagcactcg
atagaagtcgcattcctttccggattgctggctgccgaactcggggaagatgaaatcctt
gcccgccgtgccggcctgcttcatgatatcggaaaagcggtagaccatgaagtagaagga
agccatgtgcaaattggcgtcgaactcgcaaccaaatacaaggaacatccggtggtcatt
aacagtattgcttcccaccatggcgatacggaaccgacctctattatcgcggtgcttgtc
gctgccgctgatgctttatccgctgcacggcctggggcgcgcagcgaaacgcttgaacat
tacatcaggcggcttgaaaagctggaggaaatcgccgaatcgtatgaaggcgttgaaaaa
tcgttcgctatccaggcggggagagaagtacgcattatggtgaaaccggaacagatcgac
gacctggaagcccaccgcctggcacgtgatatccgcaaaaaaattgaaaatgagctggat
tatccgggccatattaaagtaacggtcattcgggaaacgcgggctgttgaatatgcaaaa
taa
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