Alkalihalobacillus clausii: ABC2708
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Entry
ABC2708 CDS
T00228
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcl
Alkalihalobacillus clausii
Pathway
bcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABC2708 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcl03400
]
ABC2708 (mutM)
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABC2708 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABC2708 (mutM)
DNA repair and recombination proteins [BR:
bcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABC2708 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BAD65243
UniProt:
Q5WEG7
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Position
complement(2839920..2840750)
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AA seq
276 aa
AA seq
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MPELPEVETVRRTLLQLVKNKTIADVDVGWPKMIKEPDDVERFIQLLKGQTIEDIGRRGK
FLLFVLNDYVLVSHLRMEGRYGLYQPTDEKTKHTHVVFSFTDGSELRYADVRKFGTMHLF
AKGAEHVAMPLAQLGVEPFSEQFTVELLEQAYAKTTRAIKTALLDQKTVVGLGNIYVDEA
LFHAGIHPERTASSLSKEEYHNLHKEIKRTLKEAIEAGGSSIKSYVNGQGEIGMFQQQLH
VYGRKQQPCHHCDTAIEKTVVGGRGTHYCPNCQPRP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccggaagtagaaacggtacgccgaacacttttgcagttggttaagaac
aagaccattgcggacgtggacgtcggctggccgaaaatgattaaagaaccagatgatgta
gaacgttttatacagctattaaaggggcaaacgatcgaagacatcgggcgcagaggcaaa
tttttgctgtttgtgctcaacgactatgtacttgtctcccatttgcggatggaagggcgc
tatggtttgtatcaaccaacggatgaaaaaacgaagcatacgcatgtcgtcttttcgttt
acagatgggtctgaattacgttatgcggatgtgcgcaaattcggtacgatgcatttgttt
gctaaaggggccgaacacgttgccatgcctcttgcccagctaggcgttgaacctttttcc
gaacagtttacggtcgaattgctggaacaagcttatgcaaaaacaacaagagcgattaaa
acagcattgcttgaccagaaaacagtcgtggggctcggcaatatttatgtcgatgaagcg
ctctttcatgcaggtatccatcctgaacggacggcttcatcactgtcaaaggaagaatat
cacaaccttcataaggaaattaaaagaacgcttaaagaagcgattgaggcagggggcagc
tcgataaaatcgtatgtaaacggccaaggggaaatcggcatgttccaacaacagctccac
gtttatggccgtaaacaacaaccgtgccatcattgcgacacagcgattgaaaagacagtc
gttggcgggcgcggaactcactattgccccaattgccaaccacggccgtga
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