Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_771
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Entry
BF29_771 CDS
T03712
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoa03019
]
BF29_771 (cshB)
03009 Ribosome biogenesis [BR:
bcoa03009
]
BF29_771 (cshB)
Enzymes [BR:
bcoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BF29_771 (cshB)
Messenger RNA biogenesis [BR:
bcoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BF29_771 (cshB)
Ribosome biogenesis [BR:
bcoa03009
]
Prokaryotic type
rRNA helicases
BF29_771 (cshB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AJH77903
LinkDB
All DBs
Position
complement(746971..748281)
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AA seq
436 aa
AA seq
DB search
MNGTKWKDFGFKPFIEKAIEHKGFAEPTEIQRKMIPLVLRGESAIGQSQTGTGKTHAYVL
PLLQKTDPSLAEVQAVITAPTRELAAQIYHEIQEVLKWEETGRITAKLFIGGTDKQRDIS
KLKKQPQIVVGTPGRVNDLVKEQALFVHTAKTFVVDEADIMLDMGFIVDVDQIAGRMPEK
LQMLVFSATIPEKLKPFLKKYMENPKFEQVAPRQIAAEKIEHILIPKRAREKIDVLHDAL
EAFNPYLAIVFANTKAMVEEIAAGLSAKGMKTARIHGDLSPRERAKTMKQIKNLEYRYII
ATDLAARGIDIEGVSHVVNYELPKDLTFYVHRAGRTARADLSGICATIYEPSDEFALTQL
EKMGIAFIYRDVRRGEWVELGDRNRRKKRVKKADKTETAARKAIGRPKKVKPGYKKKMER
QIEMLKKRQRKLQKRK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaacaaaatggaaagatttcggttttaaaccatttatcgaaaaagcgatcgaa
cataaaggctttgccgaaccgacggaaatacagcgaaaaatgatcccgcttgttttgcgt
ggggaaagtgccattggacagtcgcagacgggaacggggaaaacacatgcttatgtgcta
ccgctcttgcaaaaaacagacccgtctcttgcggaagtccaggcggtgattacggccccg
acgcgggaactggcggcacagatttaccatgaaattcaggaagtattaaaatgggaagaa
acaggccggataaccgccaaactgtttatcggcggaacggacaagcagcgtgatatcagc
aaactgaaaaaacagccgcaaattgtagtcggcacgccgggcagggtgaatgatcttgtg
aaagagcaggcgttgtttgtccatacagcaaaaacgtttgttgtcgatgaagcggatatt
atgctcgatatgggctttatcgtggatgtcgaccaaattgcggggaggatgcctgaaaaa
ctgcaaatgctcgtgttttcggcaaccattcccgaaaaattaaagccgtttttaaaaaag
tatatggaaaatccgaaattcgagcaggtagcgccgcggcaaatcgcagcagaaaaaatt
gaacatattctgatcccgaaacgcgcgcgggagaaaattgacgtgttgcatgatgccctc
gaggcgtttaacccgtacttggcgattgtatttgcaaacacaaaagcgatggtggaagaa
attgctgcagggctctcggcaaaagggatgaaaacggcccgtatccacggagacctctcg
ccgcgggaacgggcgaaaacgatgaaacaaatcaaaaacctggaataccggtatatcatt
gccactgatctggccgcgcgcgggattgatatcgaaggggtcagccatgtcgtaaactac
gagctgccaaaagatttgacgttttacgtccaccgcgccggcagaacggcccgcgccgat
ctatcgggcatatgcgcaaccatttacgaaccttccgatgagtttgccctcacgcagctt
gagaaaatggggattgccttcatctaccgtgatgtgcgccgcggcgaatgggtggaactg
ggcgaccggaaccgccgcaaaaagcgtgtgaaaaaagcggataaaacggaaaccgcggcg
agaaaggcaatcggcaggccgaaaaaagtgaagccgggctataaaaagaaaatggaacgg
cagatcgaaatgctgaaaaaacggcaaaggaaattgcaaaaacggaaataa
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