Blautia coccoides: BLCOC_20800
Help
Entry
BLCOC_20800 CDS
T09601
Symbol
pnp_1
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcoc
Blautia coccoides
Pathway
bcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLCOC_20800 (pnp_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoc03019
]
BLCOC_20800 (pnp_1)
03016 Transfer RNA biogenesis [BR:
bcoc03016
]
BLCOC_20800 (pnp_1)
Enzymes [BR:
bcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BLCOC_20800 (pnp_1)
Messenger RNA biogenesis [BR:
bcoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLCOC_20800 (pnp_1)
Transfer RNA biogenesis [BR:
bcoc03016
]
Prokaryotic type
tRNA degradation factors
BLCOC_20800 (pnp_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
S1_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
WPX73727
LinkDB
All DBs
Position
2348574..2350670
Genome browser
AA seq
698 aa
AA seq
DB search
MYKSFTMELAGRTLTVDVDRVAKQANGAAFMHYGETTVLSTATASDKPREGIDFFPLSVE
YEEKLYAVGKIPGGFNKREGKASEHAILTSRVIDRPMRPLFPKDYRNDVTLNNMVMSVDP
ECNPEVAAMLGSSIATCISDIPFDGPCAATMIGMINGELVVNPTLAQKDISDLQLTVAST
REKVIMIEAGANEIPEDKMIEAIFLAHEVNREIIAFIDKIVAECGKEKHTYESCAVPEEL
FAAIKEIVTPEAMEEAVFTDDKQTREGNIRAITEKLEEAFAENEEWLALVPDAVYQYQKK
TVRKMILKDHKRPDGREIKQIRPLAAETDLIPRVHGSAMFTRGQTQICTITTLAPLSEAQ
RLDGLDEFETSKRYMHHYNFPSYSVGETKPSRGPGRREIGHGALAERALVPVLPTTEEFP
YAIRTVSETFESNGSTSQASICASTMSLMAAGVPIKKPVAGISCGLVTGETDDDYIVLTD
IQGLEDFFGDMDFKVAGTHDGITAIQMDIKIHGLTRPIIEEAIATTKEAREYILSEVMEK
CIPAPRDHVNEYAPKIIQIQIDPEKIGDVVGQRGKTINAIIDETGVKIDIDDTGAVSVCG
TDQKMMDKALHYVKVITTDFVEGQIYTGKVVSIKDFGAFLEFAPGKEGMVHISKIAKERI
NRVEDVLTLGDKVKVICMGKDKMGRISFSIKDVPKDAQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaagttttaccatggaacttgcaggcagaaccctgaccgttgatgttgaccgt
gtggccaagcaggcaaacggcgcggcattcatgcattacggtgagaccaccgttttatca
acagcgactgcttctgacaaaccaagagaaggaattgacttcttccccttgagtgttgag
tacgaagaaaaattatacgcagtcggtaagattccgggaggatttaacaaaagagaggga
aaagcaagtgaacatgccatcttgacctcacgtgtgatcgaccgccctatgcgtccgctg
ttcccaaaggattacagaaatgatgtaactctgaacaatatggtaatgtctgtagaccct
gagtgtaaccctgaagttgctgccatgctggggtcctctattgcaacctgtatctctgac
atcccttttgacggcccgtgtgcggcaaccatgatcggaatgatcaatggagagctggtg
gtgaaccccacacttgctcagaaggacatctcagacctgcagcttacagttgcatctaca
agagaaaaagttatcatgatcgaagccggagccaatgaaattccggaggacaagatgatc
gaggcaattttcctggctcatgaagtgaaccgtgagattattgcatttattgataagatc
gtggcagagtgcggaaaagaaaaacacacttacgagagctgtgcagttccggaagagctg
tttgctgcgatcaaggagatcgtgacaccggaagccatggaagaagctgtatttacagat
gacaagcagaccagagagggcaacatccgtgccattacagagaagctggaagaggctttt
gctgagaacgaagagtggctggccctggttccagatgctgtttaccagtatcagaaaaag
acagtccgcaagatgatcctgaaagaccataagcgtccggatggccgtgagatcaaacag
atccgtcctctggcagcagagacagacctgattccgcgcgtacacggttccgccatgttt
actcgtggacagactcagatttgtaccatcacaacactggctcctctttccgaggcccag
agactggacggactggacgaatttgagacaagcaaacgctatatgcaccattataatttc
ccgtcctactctgtaggtgagacgaagccttccagaggaccgggacgccgtgagatcggc
catggtgcactggcagagcgtgcgctggttcctgtactccccacaacagaggagttcccg
tatgcgatccgtaccgtatcagagactttcgagtccaatggttctacctcacaggcaagt
atctgtgcatccaccatgtccctgatggcagcaggtgttcctattaagaaaccggtagct
ggtatctcctgtggtctggtgacaggtgaaacagatgatgattatattgtactgacagat
atccagggtcttgaagacttcttcggagatatggactttaaggtggccggtacacatgac
ggtatcactgctatccagatggatattaagatccacggactgacaaggcctatcattgag
gaagccattgccacaacaaaagaagccagagagtacatcctgtcagaagttatggagaaa
tgtattccagctcccagagatcatgtgaatgagtacgcaccgaagatcatccagatccag
atcgatccggagaagattggtgacgtggtaggccagagaggaaaaaccatcaatgccatt
atcgacgagacaggtgttaagatcgatatagatgacacaggtgcagtttctgtctgcggc
acagatcagaagatgatggataaggctcttcattatgtgaaagtgatcactactgatttt
gtggaaggccagatttacacaggcaaggttgtgagcatcaaagatttcggtgcattctta
gaatttgctcccggcaaagaaggtatggttcatatctctaaaattgccaaagagaggatc
aaccgtgttgaggatgtcctgacacttggcgacaaggtaaaggtaatctgcatgggcaag
gacaagatgggaaggatcagcttcagcatcaaggacgtgccgaaggacgcacagtaa
DBGET
integrated database retrieval system
