Sutcliffiella cohnii: BC6307_16105
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Entry
BC6307_16105 CDS
T06787
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03410
Base excision repair
bcoh03430
Mismatch repair
bcoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC6307_16105
03430 Mismatch repair
BC6307_16105
03440 Homologous recombination
BC6307_16105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoh03400
]
BC6307_16105
DNA repair and recombination proteins [BR:
bcoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BC6307_16105
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BC6307_16105
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BC6307_16105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
AST92702
UniProt:
A0A223KT72
LinkDB
All DBs
Position
complement(3208642..3210990)
Genome browser
AA seq
782 aa
AA seq
DB search
MLLSKSRWNIKKPNEEKVKELVDTLKVTPLIATLLVNRGIEDVEEASSFLNINEMDFHDP
FLLEDMEKVVERIKTAVQKEEKILVFGDYDADGVSSTTVLLTALQEIGARADFYIPNRFT
EGYGPNETAFRWAKEQNYTLIITVDTGISAHHEGEVAKELGLDLIITDHHEPSPTLPESY
AIIHPKKTTCSYPYKELAGVGVAFKVAHALLGRVPEHLIEIAAIGTIADLVPLTGENRLI
AYRGIRQMKSTTRAGLRALFQKCGVDMANITEETIGFTIGPRINAVGRLADADPAVHLLM
ATTYEEAVALVEEIDGYNKERQQIVAKITEEAIKQVEEKYPPEEHSFIIVEGYDWNAGVI
GIVASRLVDKFYRPTIVLSLDDKTGLAKGSARSIKGFDLFEHLSDCRDILPHFGGHPMAA
GMTLEMKNVHELRTRMNRKASEILTEEDFIPITDVDMQCELEDISLQTIEQLERLAPYGV
ANPKPKVVVPNASLQQIRQIGSNNTHLKLMIEKNNESLDCVGFGFGDAYHEISPSCKIHV
LGELSINEWNNIRKPQLFIQDIKIDEWQLFDIRSSKQLSNTLKQLNKEKARLVHFSSEAL
HDLPIAEEWKSNSLHIVDIENYRFSEETHLILLDLPTDEEQLISLIKLAKPTRIYASFYQ
RENHFFSTIPTRDHFKWFYSLIMKKGSIDLNRYAEDIAKTRGWSKETVDFISQVFFELEF
VTIDNGFISLNSGSMKRDLTESRTYQKKQKQIELENKFLYSTYHQLKTWFDEHVNELRTV
YS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtgttattatcaaaatctcgttggaatataaaaaagccaaatgaagaaaaagtgaaagag
ctagtagacacattaaaggtaacacctctaattgctactcttttagtcaatagaggcatt
gaagatgtagaagaagcctcatctttccttaatattaatgaaatggattttcacgatcca
ttcttattagaagatatggaaaaagtagtagaaagaatcaaaaccgctgtacagaaagaa
gaaaaaattcttgtctttggtgactatgatgctgatggtgtaagcagtacgacagtttta
ttaacagcacttcaagaaatcggggcaagagcggacttttatatacctaatcgttttaca
gaaggttatggaccaaacgaaacagcctttcgatgggcaaaggaacagaattatacgtta
atcataacagttgatacaggtatttctgctcaccatgaaggggaagttgcgaaagagtta
ggtcttgacttaattattactgaccaccatgaaccaagtccaacattaccagaatcgtat
gctattattcacccgaaaaaaacaacatgctcttatccttataaagagcttgctggagta
ggagtcgcctttaaagtagctcatgcactgctcggtagagtaccagaacatttaatagaa
attgcagcgataggaacaattgctgatttagtccctttaaccggggaaaatcgattaatc
gcgtatcgtggtattcgtcaaatgaagagtacaacaagagcgggattacgtgctttattt
caaaagtgcggtgtggacatggccaatattacagaagaaacaattggctttacaatcggt
cctagaataaacgcagttggtcggctagcagatgcggatcctgctgttcatctattaatg
gcaactacttatgaggaagcagttgcgttagtagaagaaatagatggttataataaagag
agacaacaaattgttgctaaaattacagaagaagcgataaaacaagtagaagaaaaatat
cctccagaagagcattctttcattattgtggaaggttatgattggaatgcaggggttatc
ggaattgttgcctcaagattagtggacaagttttatcgtccaacaatcgttttaagtctt
gatgataaaactggtttagcgaaaggatcagctcgctcgattaagggatttgatcttttt
gaacatttatccgattgccgtgatatattaccgcatttcggtggacatccaatggctgct
gggatgacgttagaaatgaaaaatgttcatgagctacgcactcgaatgaatagaaaagct
agtgagatattaacagaagaggattttattcctattacagatgttgatatgcaatgcgaa
ctagaagacatttcgctgcaaacgattgaacaactggaaagactcgctccgtatggagtt
gctaatcctaaaccaaaagtagttgttccgaatgcatctcttcaacaaatacgacaaatt
ggaagtaataatacacatcttaaattaatgattgaaaaaaataacgaatcgttagattgt
gtaggctttggatttggggatgcatatcatgaaatatcaccaagttgtaaaattcatgtt
ttaggtgagttatcgattaatgaatggaataatataaggaaaccacagttgtttattcaa
gatatcaaaatagacgaatggcaattatttgatatccgttctagtaaacagttatccaat
acgttaaaacaattaaataaagaaaaagcaaggttagttcatttttcgagtgaggcgtta
cacgacttgcctattgcagaagagtggaaaagtaattcattgcatatagttgatatagaa
aattatcgtttttcggaggaaacgcatttaatattattagatttaccaactgatgaagaa
cagttaatttcgttaattaaactagctaaaccaacccgaatatatgccagcttttaccaa
agagaaaatcactttttctccacaattcctactcgtgaccattttaagtggttttacagc
ttaattatgaaaaaaggatcaatcgatttaaatcgatatgcagaagatatcgcaaaaact
agaggttggtcaaaagaaacagtagattttatatcacaggtgttttttgaattagaattt
gttacaatagacaatggctttatttcattaaatagtgggtccatgaaacgagacttaaca
gaatcgcgaacctaccagaagaaacaaaagcaaatagagttggaaaataaatttttatac
tcaacgtatcaccaattaaaaacgtggtttgatgagcatgtaaacgaactacgaaccgtt
tattcatag
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