Baudoinia panamericana: BAUCODRAFT_41548
Help
Entry
BAUCODRAFT_41548 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03013
Nucleocytoplasmic transport
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_41548
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_41548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_41548
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_41548
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
BAUCODRAFT_41548
Spliceosome [BR:
bcom03041
]
Complex C
Other components
EJC/TREX
BAUCODRAFT_41548
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BAUCODRAFT_41548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
19114119
NCBI-ProteinID:
XP_007679884
JGI:
Bauco1_41548
UniProt:
M2N191
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAADSAADLEPVANTTARLKTLLERAREVKPEASIDPPLRTSDLLPEINALHDGVDARYD
QAYKVNVVETAARGIFYGLLNSTPIEKPTFVEIWNLLDVLASCGDQGVCASELVCYLIEE
LLDSQTTAGCRIVFDYLESRRERLAAKDFHKKNLIFLRSCNELLKRLSRAEDAIFCGRVF
FFLFQTFPLGDKSSVNLRGEFHNENVTKFAVPDEHGEKMEVDEKAGGAVTVKAETPQPPT
KPAGKGAPLKSPHKVPAEVVLSTGELYPIFWRLQQDFSEPTRLFAPVQFKTFKDGLSHTL
TKFKKTPTVVQTKATETDKRGVKRKLGEEGMDDEASKHFVDNYNPKYLTSRDLFDLELSD
LAFQRHILVQALILIDFLISLTDKAKKKLAVPEVNNKSLLYSFTIVEEDAKWCRDTRQAI
TDYLRATPTFEEGRFYHRMVETVLARDKNWVRWKLESCPSIVRDPVSTEQILDARRTARN
VARPRKVPQRPMGAIDLSFLAEGHGGGLEALKDPSRYTAPSVEELIEGVKADQLDLEMAM
DDAEKESIQNAITNKTWRVLRQVRESDLNLLNKVNPEKGIESLFEPAKDSS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgactctgctgcagacctagagccggtggcgaacaccaccgcccgacttaag
actctgcttgaacgagccagagaggtgaagccggaagcctccatcgacccgccgttacgc
acgtcggaccttctgcccgagatcaatgcactccacgacggtgttgatgcgcgatatgat
caggcctacaaggtcaatgttgtggaaacggctgctcgtggaatcttctatggcttgcta
aactctacgcctattgagaagcctacttttgtcgagatctggaatttactggacgttctg
gcctcgtgcggcgaccaaggtgtgtgcgcgtccgaactggtctgctacctgatcgaggag
ttactggacagccaaaccacggctggatgccgcatagtcttcgattacctggagtcaagg
cgagagcgactcgcggcgaaggatttccacaagaagaatcttatcttcctgcggtcgtgc
aacgagctgctcaaaaggttgagtcgcgccgaagatgctatcttctgtgggagggtattc
ttcttcctcttccagacgtttccgcttggcgacaagagctccgtcaacctgcgtggcgag
ttccacaatgaaaacgtcacgaagtttgcagtcccggacgagcatggagaaaagatggaa
gtcgatgaaaaggcaggtggtgccgtcacggtcaaggcagaaacgcctcaaccaccaact
aagcctgccggaaagggcgcaccgctaaagagtcctcacaaggtcccggcagaggtagtg
ctgtcaactggcgaactctatcctatcttttggcgactgcagcaggatttctcggaacca
acgcgcttgttcgctccggtgcagtttaagaccttcaaggatggcctaagccacacccta
acgaagttcaagaaaacgcctacggttgtccagaccaaagccacggagactgacaaacga
ggcgtcaagcgaaagctgggcgaagaaggtatggacgacgaagcatcaaaacacttcgtc
gacaactacaacccaaagtatctgacgagccgcgatctcttcgatctcgaattgagtgat
ctagcctttcagcggcatatcctggtgcaagctttgatactcatagacttccttatctcc
ctgacggataaggcgaagaagaagcttgcggtgcccgaggtcaacaataagtcactgctc
tacagtttcaccattgtcgaagaggatgcgaaatggtgccgagacactcggcaagccatc
acggactacctgcgcgccacacccactttcgaagaaggccgcttctaccaccgcatggtc
gaaacggttttggcgcgagacaaaaattgggtacggtggaagctcgagagctgtccatcc
atcgttagagatccggtttcaaccgagcaaatcttggatgctcgcaggactgcacgcaac
gttgcccgtccgcgtaaggtaccgcaaaggccaatgggtgccattgatctctccttcctt
gccgagggacatggtggcgggttggaagcacttaaagatccttcgcggtacactgcgccg
tcggttgaggagctgatcgagggagtaaaggccgatcagctggatctggagatggctatg
gatgatgcggagaaggagagcatacagaatgccatcaccaacaagacgtggcgcgttttg
agacaagtacgggagagcgatctgaatctgctcaacaaagtcaaccctgaaaaaggtatt
gagtcgctttttgagccggcgaaggacagttct
DBGET
integrated database retrieval system
