Baudoinia panamericana: BAUCODRAFT_486555
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Entry
BAUCODRAFT_486555 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bcom
Baudoinia panamericana
Pathway
bcom03022
Basal transcription factors
bcom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BAUCODRAFT_486555
09124 Replication and repair
03420 Nucleotide excision repair
BAUCODRAFT_486555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcom03021
]
BAUCODRAFT_486555
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_486555
Transcription machinery [BR:
bcom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BAUCODRAFT_486555
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BAUCODRAFT_486555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
Motif
Other DBs
NCBI-GeneID:
19114815
NCBI-ProteinID:
XP_007676644
JGI:
Bauco1_486555
UniProt:
M2MYM2
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MADSDAEYDGEGPDEDDVMEVSDGGRRAMASRPKERAQARWEATASSNWELQEAADGSIE
GILGGLEEAGKRKRLLKDTTPLQRGIIRHTLLVLDLSSAMLEKDLRPTRHLLTINYTIMF
VREYFEQNPISQLGIFGMREGLAIRISDMSGNPNDHIAALKQLRSTEPKGNPSLQNALDM
ARAALYHTPSHGTREVVIVLGALLSSDPGDIHDTIKACIRDRIRVRIIGLAAQMHICAEI
CRKTNGGDENYYNVAVDEVDYRQQLMDITTPPVLRSTDTEAQKHNQAALLMMGFPSRIVE
EKPTLCACHGNLTRGGYLCSRCKAKVCNLPATCPTCDLTLILSTHLARSYHHLFPLRNWV
EVSWTRARQEGSIQCFGCLTPFPRIPNPQEAVNGTEHDVASARTKRAEGASESSRYECET
CGQHFCIDCDVFCHEVVHNCPGCQSNAHLPGNQNGHDAG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctgatgccgagtacgacggagaaggtccggatgaagatgatgtgatggaa
gtcagtgacggcggacgccgtgcaatggcatcgcgaccgaaggagcgagcacaggctcgg
tgggaagccaccgcctccagcaattgggagttgcaggaagccgctgatggcagtatcgaa
ggaattttaggaggcttagaggaagctggcaaacggaagaggctgctaaaggacactacg
ccactccagcgaggtatcattcgccacactttgctcgttcttgatctatcgtctgcgatg
cttgagaaggatctccggccaactcgccatctgcttaccattaactacacaatcatgttt
gtgcgtgagtacttcgagcagaacccgatctcacagctaggcatttttggcatgcgggaa
gggctagccatccgcatcagcgacatgtctggtaatccaaatgatcatattgcggcgctc
aaacagcttcgcagcacggagccgaaaggcaacccgtcgctccaaaacgctcttgatatg
gcacgcgcagcactgtatcatacgccgtctcacggcacacgtgaggtagtcatcgtgctc
ggagcgctgctcagctccgatcccggcgacatacatgacaccatcaaagcatgcatacga
gaccggatcagagtccgcattatcggtctcgcggctcaaatgcacatctgtgccgaaatc
tgtcgcaagacgaatggcggagatgagaactattacaatgtcgctgtagatgaggttgac
taccgccagcagctgatggacatcacaacgccgcccgtactacgctcgaccgatacagag
gcccagaagcacaaccaggcagcgctgctcatgatgggcttcccgtcacggatcgtcgaa
gagaagccgactttgtgcgcctgtcacggcaacttgactcgaggcggctacctatgcagt
cggtgcaaggcgaaggtctgtaatctgcctgctacatgtcctacctgtgacttgaccttg
atcctttccacgcacctggcacgctcgtaccatcatcttttcccgctacggaactgggtg
gaggtatcatggactcgtgctcgccaggaaggcagcatacaatgctttggctgcctgaca
ccgtttccacgcatcccgaacccgcaagaagccgtgaatggtaccgagcacgacgtagcg
agtgcgaggaccaagcgagcagaaggtgcctcggaatcgagcaggtatgagtgcgagact
tgtgggcagcatttctgcattgattgtgatgtcttctgccatgaggtcgtacacaactgt
ccgggttgtcagagcaacgcacatctaccgggcaatcagaacgggcacgacgctgggtaa
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