KEGG   Baudoinia panamericana: BAUCODRAFT_78782
Entry
BAUCODRAFT_78782  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
bcom  Baudoinia panamericana
Pathway
bcom03013  Nucleocytoplasmic transport
bcom03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    BAUCODRAFT_78782
   03015 mRNA surveillance pathway
    BAUCODRAFT_78782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_78782
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     BAUCODRAFT_78782
   mRNA cycle factors
    P-body specific factors
     BAUCODRAFT_78782
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 19117209
NCBI-ProteinID: XP_007681001
JGI: Bauco1_78782
UniProt: M2LD10
LinkDB
Position
Unknown
AA seq 482 aa
MPPKTSTKTNDRPGVLPVNAAVRAASTKTPAARLKLEIRRLPPGLTLSEFEETLGDDWKL
SNGKVDWREYRQGKIKAPGKVPEQSRCYLHVVNDTLVREFEQRFLQVLFQDKAGTHRNPD
LKFLPPTLGFAPNQRTPLQSKSRADNRQGTIDQDPEFIAFLEAETQPLTKPGALDIVGAE
KERVEVKTTPLIEDLREKKANKAKAAADKADKKKAEEKKGPPGSDTKDVAAEKDGTVMQQ
KVQQAAKDAAKVLNKQAFAKQQSSVDTTQPTTAKAAASARLKKPAQSPRQQNATPRPRAT
AEGIKKMLQKDLGIKPKPTPAAPASSVQPASLPSTTPTAPSAQGPTPPIPTAPAASRPLP
SSLPHPATTKAYLKHANPSQGMTEMLILRALSEYGEVTNVTIDPRKGTAIAVFSTNEGLQ
KAMQARRVPVANGAVEVLEFKDAGFRSGAGPAPRGRGGYRGGRGGAPAGRMGGMPTPPPP
VT
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgccgcccaagaccagtacgaagacgaatgatcgcccaggtgtgctgcccgtcaatgcc
gctgttagagctgcttccaccaagactccggctgcgcgcttaaagctcgagatccgccgt
ctcccaccaggactgaccttgagcgagttcgaggagacactgggtgacgactggaagctt
agcaatggcaaggttgactggcgcgaataccgtcaaggcaagatcaaagctccgggcaag
gtacctgagcagagtagatgctaccttcacgtcgtgaacgatacacttgttagggagttc
gaacagcgcttcctgcaagttttgtttcaggacaaggctggtacgcatcgcaatccggat
ctgaagttccttccgcctacgctgggctttgcgccgaaccagagaacgccgctgcagtct
aagagccgagcggacaataggcaaggcacgatcgatcaagatccggagttcattgctttc
ctggaggcggagacgcaacctctaactaagccaggagctctggatatagtcggtgcagag
aaggagagagtggaggtcaagactacgccgctgattgaggacttgcgggagaagaaggcc
aacaaagccaaagccgcggcagacaaggcggacaagaagaaggctgaagagaaaaagggc
ccacccggcagtgacacgaaggacgttgcggcggagaaggatgggaccgtcatgcaacag
aaagtgcagcaggctgcaaaagacgcggctaaggtattaaataagcaggcctttgccaag
cagcagagttccgtcgatactacgcagccgacaacagcaaaagctgctgcgagtgcacgg
ctaaaaaaaccggcgcagtctcccaggcagcagaatgctacgcctaggccgcgcgcaact
gctgaaggcatcaaaaagatgctacagaaagatctcggcatcaagccaaaaccaacacca
gccgcaccagcaagtagcgtgcagccagcgtcgctaccatcaaccacacccactgctccg
tcagcgcagggacctacaccacctatccccacagcacccgcggcgtccagaccgttacct
tccagcttacctcatcccgcaacaacaaaagcctatctcaagcacgccaaccccagccaa
ggcatgacagaaatgctgatcctgcgcgccctgtccgagtacggagaggtcaccaacgtt
acgattgatcctcgcaaaggcactgcgatagctgtcttcagcaccaacgaaggcttgcag
aaagccatgcaagccaggcgtgtgccggtggcgaacggtgcggtggaggtgctggagttc
aaggacgcaggtttcaggagtggtgcaggaccggcgcctagagggagaggtgggtaccga
ggtgggcggggaggtgctcctgctggacgaatgggtggcatgccgacgccgccacccccg
gtaacatga

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