Bradysia coprophila: 119066242
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Entry
119066242 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119066242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119066242
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119066242
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119066242
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119066242
mRNA degradation factors
5'-3' decay
Decapping complex
119066242
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119066242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
CMS1
Motif
Other DBs
NCBI-GeneID:
119066242
NCBI-ProteinID:
XP_037024457
LinkDB
All DBs
Position
IV:complement(11489431..11495335)
Genome browser
AA seq
444 aa
AA seq
DB search
MMTENISNNHNNHPVTRGEGKIAEDSSGWKSKLKVPEKDNRIKTSDVTDTRGNEFEEFCL
KRGLLMGIFQKGWEKPSPIQEAAIPIALGGKDILARAKNGTGKTGAYCIPVLEQIDVDAD
YIQALVIVPTRELALQTSQICIELAQHLGIRVMVTTGGTVLKDDIMRIYQKVQLIIATPG
RILDLMDKEVANMSQCKILVLDEADKLLSQDFRGMLDHVIMKLPKERQILLFSATFPLSV
KNFMERHLKEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLRINQSIIFCNST
QRVELLAKKITDLGYCCYYIHARMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVN
VVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKPIPKNI
DPALYVATMANDSNSSNEDNNISK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagagaacataagtaataaccacaacaatcatcctgtcacaagaggtgaagga
aaaatcgcagaagactcatcgggctggaaatccaaattaaaagttcctgagaaagacaat
cggataaaaacaagtgatgtaactgatacccgtggaaatgaattcgaagaattctgttta
aaacgaggattgctgatgggcatttttcaaaaaggctgggagaaaccatcaccgattcaa
gaagcagccattccgatcgcacttggcggaaaagatattttagctcgtgccaaaaatggt
actggaaagacgggagcgtactgcattccggtgctggaacaaattgatgtggatgcggat
tatatccaagccttggtgattgtaccgacaagagaattggctttgcaaacgtcacagatt
tgcattgaattggcgcaacatttgggtattagagtgatggtgaccactggtggtaccgtt
cttaaggatgacattatgagaatttaccagaaagttcaactgattattgcaacgcctggt
cgtatactggatctcatggacaaggaggtggcgaatatgtcgcaatgcaagattcttgtg
cttgacgaagccgacaaactcctctcgcaggattttcgaggtatgctcgatcatgtgatt
atgaaactgccaaaggagcgccagattttgttgttttccgcaacatttccgctcagcgtg
aagaattttatggaacgacacctcaaggagccatacgaaattaatttgatggaagagctg
acgcttaaaggcgttacgcaatactacgctttcgtccaggaacgacagaaggtgcactgt
ctgaacacattgttctcgaagctgcgtatcaatcagtcgatcatcttctgcaattcaacg
cagcgtgtggaattgctggcgaagaaaattaccgacctagggtactgttgttactacatt
catgccaggatggcccaagcgcacagaaatcgtgtgttccatgattttcggcagggactc
tgcaggaatctcgtctgctccgatttgtttacgcgtggtatcgatgtacaggctgtgaac
gttgtcattaattttgattttccaaaaatggcagaaacgtatttgcatcgaatcggccgt
tcgggacgctttggtcatttgggtattgccatcaacttgatcacctatgaggaccgtttc
gatttgcatcgcatcgaaaaagagttgggcacggaaatcaagccgatacccaagaacatt
gatccagcattgtatgtcgccacaatggcgaacgattccaattccagtaacgaagataac
aacattagcaagtaa
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