Bradysia coprophila: 119072474
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Entry
119072474 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119072474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119072474
03009 Ribosome biogenesis [BR:
bcoo03009
]
119072474
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119072474
Spliceosome [BR:
bcoo03041
]
Complex A
U1 snRNP components
U1 related factors
119072474
Complex B
119072474
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119072474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Clathrin
Motif
Other DBs
NCBI-GeneID:
119072474
NCBI-ProteinID:
XP_037033594
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Position
IV
Genome browser
AA seq
535 aa
AA seq
DB search
MFLSTICTWTVLTKHSVHIAAKYTHLPVLYPRFSTFRNYGNNESGRNSQRNFGSPQFNRN
KDFRNKKHEEKPDWKPFEKNFYKPPDIVHPKEDIDRFISKHKITVNGPAPTPILSFDEVS
FPHYIQNELKVKDFTTPTPIQSQCWPIALSGQNLVGVAQTGSGKTLGYILPAIVHIKNQE
ELKQKEGPIALVLAPTRELAQQIQQVANEFGEPCNVRNACVFGGADKGPQIHALHQGSEI
VIATPGRLNDFLKTGLTNLNRCTYLVLDEADRMLDMGFEPQIRRIIERIRPDRQTLMWSA
TWPKHVRNLAEDFLGSFTQINVGSMELCANQNIKQVVQVCEEAYKRNELQFLLEKIYDQD
GAVGKTLVFAETKQSVDHLAKFIQNFGVECCAIHGDKSQADRDNTLNAFRSGGINILVAT
DVASRGLDVDGIDWVINYDYPYTTEDYIHRIGRTGRGDATGTAHTFFTRKNADRARDLVA
VLLQAKQEVPDDLLEMARGVGPVVLNKPFDGNSFKRNFGNQSLKGGVVTKKTFRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtccaccatttgtacttggacagtgttgaccaaacattctgtacacatagca
gccaaatacacacatcttccggttctctatccacgattctcgacatttcggaattatggc
aacaatgagtctggccgcaattcacaacgtaatttcggcagtccacaattcaatcgcaat
aaagattttcgcaacaaaaaacacgaggaaaaaccagactggaaaccattcgaaaagaat
ttctacaagccgcctgacatcgtacatccgaaggaagacatcgacagatttatcagcaaa
cacaaaatcactgttaacggaccggcaccaactccgatactgtcattcgatgaggtttcc
ttcccgcactacatacaaaatgaattaaaggtcaaggactttacgacacccacaccgatc
cagtcacaatgttggcccattgcgttgagtggacaaaatttagttggtgttgcccaaaca
ggcagcggaaagacattgggatacattttaccggccattgttcacataaagaatcaggaa
gagttgaaacagaaagaaggtccaattgcgctcgtcctcgctccaactagagaactagca
caacagatccaacaagttgcaaatgaatttggtgaaccgtgcaacgttcggaacgcctgt
gtgtttggtggtgctgacaaaggtccacaaattcatgccctgcatcaaggaagtgaaatt
gtcattgctactcctggacggcttaacgatttccttaaaactggactgacgaatcttaat
cgctgcacatacttagtattggacgaagcggatcgtatgcttgacatgggtttcgagcca
caaataagaagaattattgagcgaattcgtccagaccgacagactctgatgtggtcagcg
acgtggcctaaacatgtgcgtaacctagctgaagatttcctcggttcgtttacacaaatc
aatgtgggatctatggagctatgcgctaatcagaacatcaaacaagtggtgcaggtatgc
gaagaagcctacaaacggaatgaacttcaatttcttctcgaaaagatctacgatcaagat
ggagctgtaggaaagaccctcgtattcgccgaaacgaaacagagtgtcgatcatctagca
aagtttattcagaattttggtgtagaatgctgtgcaattcatggtgacaagtcacaagcc
gatcgagacaatacattgaatgcattccgcagcggaggtattaacattttagtggcaaca
gatgtggcttcccggggcttagatgtcgacggaatagactgggtgataaactatgattat
ccatacacaacggaagactacattcatcgaataggtcgtaccggacgtggtgatgcaact
ggaacggcacatacattctttaccagaaagaatgccgacagagcaagagatttagttgct
gtgctgctgcaagcaaagcaagaagtgcccgatgatttattggaaatggctagaggtgtt
ggccctgtggtattgaataaaccattcgatggaaattcgtttaaaagaaatttcgggaat
caatctttgaaaggcggagttgtaacaaagaaaacgtttcgaaggtga
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