Cytobacillus dafuensis: FSZ17_16690
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Entry
FSZ17_16690 CDS
T06982
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03410
Base excision repair
bda03430
Mismatch repair
bda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FSZ17_16690 (recJ)
03430 Mismatch repair
FSZ17_16690 (recJ)
03440 Homologous recombination
FSZ17_16690 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_16690 (recJ)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FSZ17_16690 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FSZ17_16690 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FSZ17_16690 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Glutaredoxin2_C
Motif
Other DBs
NCBI-ProteinID:
QED48756
UniProt:
A0A5B8ZBA1
LinkDB
All DBs
Position
complement(3488993..3491359)
Genome browser
AA seq
788 aa
AA seq
DB search
MLHSKTRWIVRNSDEEKENQLVQDLNITPLLASLLVNRGLDIPESARYFLFDHDQEFHDP
YLLNGMDIAVSRIKTAIEKQEPLLVFGDYDADGVTSTTVVMKTLRELGANVQFYIPNRFT
EGYGPNIPAFQYAAEIGIKLIITVDTGIAAVNEAKAAKELGLELIITDHHEPGPELPEAL
SIIHPKLTNSQYPFRELAGVGVAFKLAHALYGGLPEHLLEIAAIGTIADLVSLKGENRLI
VKRGIKKLQSTKNVGLKALLKLNKVEASSINEETIGFLIAPRLNAAGRLDSADPAVDLLL
TEDIDEAEAIAAEIDQMNKDRQALVSEIAEQAIREVEEKYPINEHSVLVIGKEGWNAGVI
GIVASKLVEKFYRPAIVLSYDKEKGLAKGSARSIMGFDLFKNLSDSRDILPHFGGHPMAA
GMTLQLEHVDELRMRLNQAAKTQLKDEDFIPVTTLDGSIPLHDIDLASIEEMQLLSPYGM
DNPKPKILIKDANISGMRKIGSDQNHLKMTIEHDGKTLDGVGFGLGTLHDHISPHSKISV
IGELSINEWNNIRKPQIFLQDLAIDDWQLFDIRGIKRLGQLEELIPKEHSKWIVFNHDNA
NKFQSYTNEKVVTVSSIEEAAALNIEMENVILLDMPSSKELLANIFLGKNPARIYAHFYK
EDSAYFSTIPTREHFKWFYAFLLKQGPLDIDRYGMEIAKYKGWSRETIDFMSQVFFELDF
VKINNGIISINETSQKRDLTESLVYEQRRAQFSLESDLLYSTYHQLKSWFDSVIQGSVKF
EEAIKEWT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttacattcaaaaacaagatggattgttcggaattctgatgaagaaaaggaaaatcaa
ttagtacaagatttaaatattactcctctcctggcttctctactagttaatcggggatta
gatatacccgaatcagcaaggtattttttatttgatcatgatcaagaatttcatgatcct
tatttattaaatggtatggatatagcagtatcacggataaaaacggcgatagaaaagcaa
gaaccattattagtatttggagactatgatgcagatggtgttacaagcaccactgtcgtg
atgaaaactcttagagaacttggggccaatgttcagttttacattcccaaccgttttaca
gaaggatatggaccgaatattcctgcttttcaatatgcagcagaaattggaataaaattg
attatcacggttgatacaggaattgctgctgtaaatgaagcaaaggcagcgaaagagctt
ggtcttgaattaattattacggatcaccacgaaccaggacctgaattgcctgaggcactt
tcaattattcatcccaagctaacgaatagccaatatccttttcgtgagctggctggagtg
ggtgtcgcatttaaattagctcatgctttatacggtggattacctgaacatttacttgaa
attgcggccattggtacaattgcagatttagtatcgttaaaaggagaaaatcgcttaatt
gtaaaacgtggaattaaaaaattacagtctacgaaaaatgttggtttaaaagcattactg
aaattaaataaagtagaggcaagttcaattaatgaagaaacgattggttttcttattgca
ccgcgcttaaatgctgctggaagattagacagcgctgatccagctgttgatttgctttta
acagaggatattgatgaagcagaggcaattgcagcagagattgatcagatgaataaggat
aggcaggcactcgtaagcgaaatagctgagcaagctattcgtgaagtagaggaaaagtat
ccaataaacgaacattccgttcttgtcattggaaaagagggctggaatgcaggagtaatt
gggattgttgcttcaaagcttgttgaaaaattttatcgtcctgcaatcgtattaagctac
gataaagaaaaaggtctggcaaagggttctgctcgcagtattatgggttttgatttattt
aagaatctttccgatagtagagatattttgccacatttcggcggccatcctatggctgct
ggaatgactttacagcttgagcatgttgacgaactgcgaatgagattaaatcaagcagcg
aaaacccaactaaaagatgaggactttattccagtaacgactctagatggaagcatccct
ttacatgatattgacctagcttctatagaggaaatgcagttgctgtctccttatggcatg
gataatccaaaaccgaaaatattaattaaagatgctaatatttctggcatgagaaagatc
ggttcagatcaaaaccatttgaaaatgacaatagaacatgatggcaaaacacttgatggt
gttggcttcgggttaggaactttgcatgatcacatttctccacattcaaaaatatccgta
atcggtgaactttcgattaacgaatggaataatattcgaaagccacaaatctttcttcaa
gatttagcgattgatgactggcagctttttgatattagaggtataaaacgtcttgggcaa
ctagaagaactcatcccaaaggaacattccaagtggattgtttttaatcatgacaatgca
aataaatttcaatcatatacaaatgaaaaagtagtaactgttagttctattgaagaagca
gctgcattaaatatagaaatggaaaatgtcattttattggatatgccttcatcaaaggaa
ctgctcgctaatatatttttagggaaaaatccagctagaatatatgcacatttttataaa
gaagatagtgcttactttagtacaattccgacacgtgaacatttcaaatggttttatgct
tttttattgaagcaaggacctcttgatattgatagatatggaatggaaatcgctaaatat
aaaggctggagcagggaaacaattgactttatgtcacaggtgttttttgaactagatttt
gttaaaataaacaatggaattatttccataaatgagacttcacaaaaacgtgatttaaca
gaatcgcttgtttatgagcaaagacgtgcacagttttctcttgaaagcgatttattgtat
tcaacctatcatcagttaaaaagttggtttgattcagtaatccaaggttctgtgaaattt
gaggaggcaataaaagaatggacttaa
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