Bifidobacterium dentium Bd1: BDP_0314
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Entry
BDP_0314 CDS
T01143
Symbol
ffh
Name
(GenBank) ffh Signal recognition particle, subunit FFH/SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde02024
Quorum sensing
bde03060
Protein export
bde03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BDP_0314 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BDP_0314 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BDP_0314 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bde02044
]
BDP_0314 (ffh)
Enzymes [BR:
bde01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BDP_0314 (ffh)
Secretion system [BR:
bde02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BDP_0314 (ffh)
Eukaryotic Sec-SRP protein
BDP_0314 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
ArsA_ATPase
cobW
AAA_31
MeaB
AAA_24
Zeta_toxin
APS_kinase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADB08994
UniProt:
D2Q858
LinkDB
All DBs
Position
complement(392582..394207)
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AA seq
541 aa
AA seq
DB search
MTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTGRIRERALGTEV
SQALNPAQQVVKIVNEELTDVLGAGVDRPLNFAKNPPTIIMLAGLQGAGKTTLAGKLGYW
LKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSAGGEAVASPGLTTGDP
VKVARDSVAFARQKLYDTVIIDTAGRLGVDEELMRQARDIRDAVQPNEILFVIDAMIGQD
AVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDFEVFHPD
RMASRILDMGDILTLIEQAQKQFDEEEARKAAVKISDGSFGLDDFLDQLQQVRKLGPMKN
LLGMIPGMAAHRKELEQFDEKEIDRTEAIIRSMTPAERRDPSIIDGSRRARIAYGSGVTV
SQVNALLQRFEQASKMMRRMSNKAGAGMPGFGGPSMGGGKGKSKKGKKKGSKSGNPMKRE
AEEKALRDKLAGKNSGGKSSGSAFAKKPQNPALPAGLQDVMGDSGTELPPNFGGGLSGLL
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacaggctctcgaatgccttcaagcatctgaagagcaaaggcaagctttccgag
gccgatatcgacggtacgatccgtgagattcgccgcgcgctgctcgacgccgatgtggcg
ctcgacgtggtgcgttcctttaccggccgtatccgcgagcgtgcgctcggcactgaggtt
tcgcaggcgctgaatccggcgcagcaggtcgtgaagatcgtcaacgaagagctcactgac
gtgctcggcgccggcgtggatcgtccgctgaacttcgcaaagaatccgccgacgatcatc
atgctcgcaggccttcagggcgccggtaagacgacgctcgccggcaagctgggctattgg
ctgaaggattccggccataccccgctgcttgtcgcggccgatttgcaacgtccgaacgcg
gtgacgcagttgcaggtggtcggcgagcgcgccggcgtaccggtgtatgcgccggaaaag
ggcgtgcagtccgccggcggtgaggccgttgcctctccgggcctgaccaccggagacccg
gtgaaggtggcccgcgattccgtggcgttcgccaggcagaagctgtatgacacggtcatc
atcgataccgcaggccgtctcggtgttgatgaggaactgatgaggcaggcccgcgatatc
cgcgatgccgtgcaaccgaatgagatcctgttcgtcatcgacgcgatgatcggtcaggat
gccgtgcagacggcgaaggcgttcgacgaaggcgtggacttcaccggcgtggtgctttcc
aagcttgatggcgatgctcgtggcggtgccgcgctttccgtcgcatccgttaccggcaag
ccgatcctgttcgcttcgacgggcgaaggattgaaggatttcgaagtcttccacccggat
cgcatggcttcccgcatcctcgacatgggcgatatcctcaccctgatcgagcaggcgcag
aagcagttcgatgaggaggaggcccgtaaggccgccgtgaagatttccgacggctccttc
ggtcttgacgatttcctcgaccagctgcagcaggtgcgcaagctcggcccgatgaagaat
ctgctcggcatgattcctggcatggccgcgcaccgtaaggaacttgaacagttcgatgag
aaggagatcgaccgtaccgaagccatcatccgttcgatgactccggcggagcgacgcgat
ccttcgattatcgacggttcccgtcgcgcccgtatcgcctacggttccggcgtgaccgtc
tcgcaggtcaatgcgctgttgcaacgtttcgagcaggcctcgaagatgatgcgccgcatg
agcaacaaagccggtgccggcatgcccggtttcggcggcccgtccatgggtggcggcaag
ggcaagagcaagaagggcaagaagaagggttccaagtccggcaatccgatgaagcgcgag
gctgaggagaaagcattgcgggacaagctcgccggcaagaactccggcggcaagtcgagt
ggctccgctttcgccaagaaaccgcagaatccggcgcttccggctggtttgcaagatgtg
atgggcgattcgggcacggagttgccgccgaacttcggcggcggtctgtccggtctgctg
cactga
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