Bifidobacterium dentium Bd1: BDP_1614
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Entry
BDP_1614 CDS
T01143
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BDP_1614 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bde03400
]
BDP_1614 (recO)
DNA repair and recombination proteins [BR:
bde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BDP_1614 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BDP_1614 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
ADB10206
UniProt:
D2Q5J1
LinkDB
All DBs
Position
complement(1810006..1810734)
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AA seq
242 aa
AA seq
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MPLYQDEGVVLRTAKLGEADRIITLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVDVL
VAEGRSLDVISQAESISAYAGPICADYGAYAAANVIAETADKLVAGEHERMTMQYRLVLG
ALNALAKHAHDSNAIGDSYVMRALALAGWTPRLRACVVCGDPIDAGRTWYFSIPAGGVMC
SADHTPESTLIPWNTLCQMQALVDGDWGELDTAPLTAETRQLVEKWGEYYLERPIRSLRL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtatcaggacgaaggagtcgtgctgcgcacggcaaaactcggtgaagccgat
cgcatcatcaccttgttgacgcgcgaccacggcaagatccgtgccgttgccaaaggtgtg
cgccgtaccaaatcacggttcggcgggcgtctggaaccgttcatgcgtgtggatgtgctg
gtagccgaaggccgctcccttgatgtgatctcacaggccgaatcgatttccgcctatgcc
ggaccgatctgcgccgactatggcgcctatgccgcagccaatgtgatcgccgaaaccgcc
gacaaactcgtggccggcgaacacgagcgtatgacgatgcagtaccggctggtgttgggt
gcgttgaatgcgcttgccaaacatgcgcatgattcgaatgcgatcggagactcctatgtg
atgcgggcattggcacttgcaggatggactccgcgcttgcgtgcctgcgtggtctgcgga
gatccgatcgatgccggaaggacctggtatttttcgattccagccggtggcgtgatgtgc
tccgccgaccacactccggaatccacgctgattccttggaacacactctgccagatgcag
gcgctggtcgacggcgattggggagagttggatacggcaccactgaccgccgaaacccgc
caattggtggaaaaatggggcgagtactatctggagcggccgattcgttcgctgcgcttg
ctagattag
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