KEGG   Bifidobacterium dentium Bd1: BDP_1749
Entry
BDP_1749          CDS       T01143                                 
Symbol
gadB
Name
(GenBank) GadB glutamate decarboxylase
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
bde  Bifidobacterium dentium Bd1
Pathway
bde00250  Alanine, aspartate and glutamate metabolism
bde00410  beta-Alanine metabolism
bde00430  Taurine and hypotaurine metabolism
bde00650  Butanoate metabolism
bde01100  Metabolic pathways
bde01110  Biosynthesis of secondary metabolites
bde01120  Microbial metabolism in diverse environments
bde02024  Quorum sensing
Module
bde_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:bde00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    BDP_1749 (gadB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    BDP_1749 (gadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    BDP_1749 (gadB)
   00430 Taurine and hypotaurine metabolism
    BDP_1749 (gadB)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BDP_1749 (gadB)
Enzymes [BR:bde01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     BDP_1749 (gadB)
SSDB
Motif
Pfam: Pyridoxal_deC Aminotran_5 DotU
Other DBs
NCBI-ProteinID: ADB10338
UniProt: D2Q5X3
LinkDB
Position
1980774..1982204
AA seq 476 aa
MSIMHSNINTIAAGYGYSGGADSDSVEVNPLFARPKEAKAFSKFKIPQEGSLPETAYQVV
HDDAMLDGNARLNLATFVSTWMDDYANRLYMEAADKNMIDKDEYPKTAEVESRCWHMLAD
LWHAPDPMNTIGTSTIGSSEACMLGGLALKRRWKEAREKAGLPADRPNLVMSSAVQVCWE
KFCNYFDVEPRYVPISEEHKVLDGYDLDKYVDENTIGVVAIMGVTYTGMYEPVKKISDAL
DRIEERTGLDVRIHVDAASGGMIAPFIQPDLQWDFRVKRVYSISTSGHKYGLVYPGLGWV
VWRETADLPESLIFKVSYLGGEMPTFALNFSRPGAQVLLQYYMFLRLGFEGYRRVQQAAH
DVAKYLSGEIAKMDDFTLWNDGSDIPVFAWMLKDKPDRKWNLYDLQDRLRMKGWLVPAYP
MPVDLTQVTVQRIVVRNGFSHDMAESFLKDLKACVKYLDGLKAPMPSEARVSGFHH
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcgataatgcattccaacatcaataccatcgcggcaggttatggttattctggtggt
gccgattccgacagcgtggaagtcaacccactgttcgcccgtccgaaggaagccaaggcc
ttctctaagttcaagattccgcaggaaggaagcctaccggagaccgcctatcaggtggtg
cacgacgacgccatgcttgacggcaacgcacgcctgaacctcgcgaccttcgtaagcacc
tggatggacgattatgcgaaccgcctgtacatggaggcggccgacaagaacatgatcgac
aaggacgagtacccgaagaccgccgaagtcgaatcccgctgctggcatatgctcgccgac
ctctggcatgcgccggacccgatgaataccatcggaacctccaccatcggctcctccgag
gcatgcatgctgggcggcctggccttgaagcgccgctggaaggaagcgcgagaaaaggcc
ggcctgccggccgatcgaccgaatctggtgatgagcagcgccgtgcaggtgtgctgggag
aagttctgcaactacttcgacgtggaaccgcgttacgtgccgatctccgaagagcacaaa
gtgcttgacggctacgacctcgacaagtacgtcgacgagaacaccatcggcgtggtggcc
atcatgggcgtgacctacacgggcatgtacgagccggtcaagaagatctccgacgcgttg
gaccgcatcgaggaacgcaccggactcgatgtgcgcatccacgtggatgccgcttcgggc
ggtatgatcgcaccgttcatccagcccgaccttcagtgggacttccgcgtcaagcgcgtg
tactccatcagtacctccggacacaagtacggtctggtctacccgggcctgggctgggtg
gtatggcgtgagaccgccgacctgccggaaagcctgatcttcaaggtgagctatctgggc
ggcgaaatgccgacctttgcgctgaacttctcccgccccggcgctcaggtgctgttgcag
tactacatgttcctgcgtttgggattcgaaggctaccgccgcgtgcagcaggccgcgcac
gatgtggcgaagtacctgtcgggcgaaatcgccaagatggacgacttcactctatggaac
gacggttccgatattccggtgttcgcttggatgctcaaggacaagccggatcgcaagtgg
aacctgtacgatctgcaggatcgtctgcgcatgaagggctggctagtgccggcctatccg
atgccggtggatctaacgcaggtgaccgtgcagcgcatcgtggtgcgcaacggattcagc
catgatatggccgaatcgttcctgaaggatctgaaggcctgtgtgaagtatctggatgga
ttgaaggcgccgatgccgagcgaggcacgggtctccggcttccatcactga

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