Bifidobacterium dentium Bd1: BDP_1749
Help
Entry
BDP_1749 CDS
T01143
Symbol
gadB
Name
(GenBank) GadB glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00250
Alanine, aspartate and glutamate metabolism
bde00410
beta-Alanine metabolism
bde00430
Taurine and hypotaurine metabolism
bde00650
Butanoate metabolism
bde01100
Metabolic pathways
bde01110
Biosynthesis of secondary metabolites
bde01120
Microbial metabolism in diverse environments
bde02024
Quorum sensing
Module
bde_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BDP_1749 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BDP_1749 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BDP_1749 (gadB)
00430 Taurine and hypotaurine metabolism
BDP_1749 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BDP_1749 (gadB)
Enzymes [BR:
bde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
BDP_1749 (gadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DotU
Motif
Other DBs
NCBI-ProteinID:
ADB10338
UniProt:
D2Q5X3
LinkDB
All DBs
Position
1980774..1982204
Genome browser
AA seq
476 aa
AA seq
DB search
MSIMHSNINTIAAGYGYSGGADSDSVEVNPLFARPKEAKAFSKFKIPQEGSLPETAYQVV
HDDAMLDGNARLNLATFVSTWMDDYANRLYMEAADKNMIDKDEYPKTAEVESRCWHMLAD
LWHAPDPMNTIGTSTIGSSEACMLGGLALKRRWKEAREKAGLPADRPNLVMSSAVQVCWE
KFCNYFDVEPRYVPISEEHKVLDGYDLDKYVDENTIGVVAIMGVTYTGMYEPVKKISDAL
DRIEERTGLDVRIHVDAASGGMIAPFIQPDLQWDFRVKRVYSISTSGHKYGLVYPGLGWV
VWRETADLPESLIFKVSYLGGEMPTFALNFSRPGAQVLLQYYMFLRLGFEGYRRVQQAAH
DVAKYLSGEIAKMDDFTLWNDGSDIPVFAWMLKDKPDRKWNLYDLQDRLRMKGWLVPAYP
MPVDLTQVTVQRIVVRNGFSHDMAESFLKDLKACVKYLDGLKAPMPSEARVSGFHH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataatgcattccaacatcaataccatcgcggcaggttatggttattctggtggt
gccgattccgacagcgtggaagtcaacccactgttcgcccgtccgaaggaagccaaggcc
ttctctaagttcaagattccgcaggaaggaagcctaccggagaccgcctatcaggtggtg
cacgacgacgccatgcttgacggcaacgcacgcctgaacctcgcgaccttcgtaagcacc
tggatggacgattatgcgaaccgcctgtacatggaggcggccgacaagaacatgatcgac
aaggacgagtacccgaagaccgccgaagtcgaatcccgctgctggcatatgctcgccgac
ctctggcatgcgccggacccgatgaataccatcggaacctccaccatcggctcctccgag
gcatgcatgctgggcggcctggccttgaagcgccgctggaaggaagcgcgagaaaaggcc
ggcctgccggccgatcgaccgaatctggtgatgagcagcgccgtgcaggtgtgctgggag
aagttctgcaactacttcgacgtggaaccgcgttacgtgccgatctccgaagagcacaaa
gtgcttgacggctacgacctcgacaagtacgtcgacgagaacaccatcggcgtggtggcc
atcatgggcgtgacctacacgggcatgtacgagccggtcaagaagatctccgacgcgttg
gaccgcatcgaggaacgcaccggactcgatgtgcgcatccacgtggatgccgcttcgggc
ggtatgatcgcaccgttcatccagcccgaccttcagtgggacttccgcgtcaagcgcgtg
tactccatcagtacctccggacacaagtacggtctggtctacccgggcctgggctgggtg
gtatggcgtgagaccgccgacctgccggaaagcctgatcttcaaggtgagctatctgggc
ggcgaaatgccgacctttgcgctgaacttctcccgccccggcgctcaggtgctgttgcag
tactacatgttcctgcgtttgggattcgaaggctaccgccgcgtgcagcaggccgcgcac
gatgtggcgaagtacctgtcgggcgaaatcgccaagatggacgacttcactctatggaac
gacggttccgatattccggtgttcgcttggatgctcaaggacaagccggatcgcaagtgg
aacctgtacgatctgcaggatcgtctgcgcatgaagggctggctagtgccggcctatccg
atgccggtggatctaacgcaggtgaccgtgcagcgcatcgtggtgcgcaacggattcagc
catgatatggccgaatcgttcctgaaggatctgaaggcctgtgtgaagtatctggatgga
ttgaaggcgccgatgccgagcgaggcacgggtctccggcttccatcactga
DBGET
integrated database retrieval system