Bradyrhizobium daqingense: LPJ38_33305
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Entry
LPJ38_33305 CDS
T07756
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00521
Streptomycin biosynthesis
bdg00523
Polyketide sugar unit biosynthesis
bdg00541
O-Antigen nucleotide sugar biosynthesis
bdg01100
Metabolic pathways
bdg01110
Biosynthesis of secondary metabolites
bdg01250
Biosynthesis of nucleotide sugars
Module
bdg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LPJ38_33305 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LPJ38_33305 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LPJ38_33305 (rfbC)
Enzymes [BR:
bdg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LPJ38_33305 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UFS88459
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All DBs
Position
complement(6955276..6955833)
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AA seq
185 aa
AA seq
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MLELRSLAIPDVKVVRPDRFSDARGYFSETFQRSTFAEKGILHDFVQDNQSSSKRIGTVR
GLHFQRPPFAQAKLIRVLSGAILDVAVDLRRSSPSFGKHIAIQLDGESGEQVFIPKGFAH
GFCTLQPNTVVLYKVDQVYAPSHDGGVYWADPALEIEWPVTTSEAQLSPKDQILPALSQL
GCVFD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctggaattacgatccttggcgatccccgacgtcaaagtagttcgcccggatcggttt
tccgacgcccgcggttacttctctgagactttccagcgatcgaccttcgcggagaagggc
atcctccatgacttcgttcaggataatcagtccagctcgaagcgcatcggcacggtgcgc
ggcctgcactttcagcgtccgcctttcgcgcaggccaagctgatacgggtgttgagcggc
gccattctcgacgtcgcggtggatctccggcgttcatcgccgagtttcggcaagcacatc
gccattcaactggatggtgaaagcggcgagcaggttttcattccgaaaggttttgcgcat
ggcttttgcacgctgcagcccaataccgtcgtcctctacaaggtcgaccaggtctacgcc
ccgagccatgacggtggcgtctattgggccgatccggcgctagagatcgagtggcccgtg
acaacctcggaggctcagttgtcgccgaaggaccagatccttcctgcgctgagccaactc
ggttgcgtgttcgactga
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