Brachypodium distachyon (stiff brome): 100827456
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Entry
100827456 CDS
T01717
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100827456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100827456
Membrane trafficking [BR:
bdi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
100827456
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
CorA
Prefoldin_3
Motif
Other DBs
NCBI-GeneID:
100827456
NCBI-ProteinID:
XP_003565137
UniProt:
I1HVH2
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All DBs
Position
2:complement(58456745..58459427)
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AA seq
212 aa
AA seq
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MKITALLVLRSPGDSSSSSSATGGGGGEQQAAVLANASDVTQFGFFQRPAAREFIVFVAR
TVALRTPARSRQSVQHEEYMVHCYNQNGLCAVAFTDDHYPRLSAFSLLNQILEEYVKNFG
ESWRTANDNATQQWQYLNDALTKYQDPAEADKLLKIQRDLDETKIILHKTIDSVLQRGEK
LDKLVEKSSDLSAASQMFYKQAKRTNSCCTIL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcgctgctggtgctcaggtcgcccggcgactcctcctcctcctcgtcg
gcgacggggggcggcggcggggagcagcaggcggcggtgctggcgaacgcgtcggacgtg
acccagttcggcttcttccagcggcccgcggcgcgcgagttcatcgtcttcgtcgcacgc
accgtcgcgctccgcacccccgcccgcagccgccagtccgtccagcacgaagagtacatg
gtgcattgctacaaccagaacggcctctgcgccgtcgccttcaccgacgaccactacccc
cgcctcagcgccttctctctcctcaaccagattctggaggagtacgtgaagaattttggg
gagtcatggaggacagcaaacgacaacgccacccagcaatggcaatatttgaatgacgcg
ttaacaaaataccaggatcctgcagaggcggacaaattgctgaaaattcagagagacttg
gatgaaaccaagatcattcttcacaaaaccattgatagtgtgctgcaaagaggcgagaaa
ttggataagctagtggagaagagttcagatctgagcgctgcttcacagatgttctacaag
caggccaagagaaccaactcttgctgtacaatcctgtaa
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