Brachypodium distachyon (stiff brome): 100828384
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Entry
100828384 CDS
T01717
Name
(RefSeq) beta-galactosidase 8 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00052
Galactose metabolism
bdi00511
Other glycan degradation
bdi00531
Glycosaminoglycan degradation
bdi00600
Sphingolipid metabolism
bdi00604
Glycosphingolipid biosynthesis - ganglio series
bdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
100828384
09103 Lipid metabolism
00600 Sphingolipid metabolism
100828384
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
100828384
00604 Glycosphingolipid biosynthesis - ganglio series
100828384
00511 Other glycan degradation
100828384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100828384
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
100828384
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100828384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
100828384
NCBI-ProteinID:
XP_003568002
LinkDB
All DBs
Position
2:16331341..16339621
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AA seq
674 aa
AA seq
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MASGRSFLDLCLLALSLCSALASTVDGGASRRFWIEGDAFRKDGERFQIVGGDVHYFRIV
PEYWKDRLLRAKALGLNTVQTYVPWNLHEPEPQSWEFNGFADIESYLRLAHELEMLVMLR
VGPYICGEWDLGGFPPWLLTIEPALKLRSSDSAYLSLVERWWKVLLPKVAPLLYSNGGPI
IMVQIENEFGSFGDDKNYLHYLVLLARRYLGNDIILYTTDGGTIGTLKNGSIHQDDVFAA
VDFSTGDDPWPIFRLQKEYNFPGKSAPLTAEFYTGWLTHWGESIATTDASSTAKALKSIL
CRNGSAVLYMAHGGTNFGFYNGANTGQNESAYKADLTSYDYDAPIKEHGDVHNPKYKALR
SVIHECTGTPLHPLPANIERSNYGLVKLQKVASLFDIFDKIGDPLKVSVSEQPLSMEQTG
QMFGFLLYSSEYEGKGPYSILSIPKVHDRAQVFVSCSLDGVRNRRYAGIIERWSKKTLQI
PSLSCSSKTSLYILVENMGRVNYGPYIFDLKGILSSVEIDGVTVRHWKMYPLSFDALGEL
SKFQPIQQITDARASKVPIHGYLQSKFRDSSFYQNVGISEGPEFYEGHFVIGSENAIKDT
FISFRGWNKGVAFVNNFNIGRFWPAMGPQCALYVPAPILKSGDNVVVIFELHSPNPEHTI
NLVKDPDFTCGPNQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggtagaagcttccttgatctctgcctcctcgcgctgtcgctctgctccgcg
ctcgcctccacggtcgatggcggggcttcgagaaggttctggatcgagggcgacgccttc
cggaaggacggggagcggttccagatcgtcggcggcgacgtgcactacttccgcattgtt
cccgagtactggaaagaccgcctgctaagggctaaggcactaggcttgaacacggttcaa
acatatgttccttggaatttgcatgagccggaaccgcagagctgggaattcaatggattt
gccgacattgaatcgtacctaagacttgctcatgaattagagatgctggtcatgcttcgt
gtcggtccatatatttgtggagaatgggacttagggggatttccaccttggttgctcacc
atagaaccagcccttaaactgcgatcatcagattcagcctatctttccttggtcgagaga
tggtggaaagtattacttccaaaagtggcaccactattatacagcaatggaggtccaatt
atcatggtgcagattgaaaatgaatttgggtcatttggagatgacaagaattacctccat
taccttgttctactagccagacgatatctggggaatgacattattctgtatacaactgat
gggggcaccattgggaccttaaagaatggatcaattcatcaagatgatgtttttgctgct
gttgatttttctacgggcgatgatccatggccaatattcagattacagaaggaatacaac
tttccaggaaaatcagcccctttaaccgcggaattttataccggatggctaacacactgg
ggtgaaagtattgcaacaacagatgctagcagcacagctaaagctcttaaaagtattttg
tgccgcaacggttctgctgtactttatatggctcatggtgggaccaattttgggttttac
aatggggcaaatactggccaaaatgagtccgcgtacaaagctgacctcacttcttatgat
tatgatgcgcctattaaggagcacggggacgtgcataatccaaaatacaaagcactgaga
agtgtaatacatgaatgcactggcactcctcttcatcctcttcctgccaacattgaaaga
tcaaattatgggctcgtgaaactacaaaaggttgcttctttgtttgacatatttgataag
ataggtgatcctctgaaagtgtctgtctcagagcagcctctgtccatggaacagacaggc
cagatgtttgggtttctactttactcctcggaatacgaagggaaaggtccttacagcatc
ctatcaattccaaaggtacatgacagagcccaggtttttgtgtcctgctcacttgatggt
gtcagaaatcgaagatatgctggcattattgaaagatggtctaagaaaaccctacagata
ccgagcttgagctgctcatctaagaccagcttatatatcctggtagaaaatatgggccgc
gtaaattatgggccatatatttttgacctgaaggggatattatcttctgttgaaatagat
ggtgttactgtccgtcactggaaaatgtatcctctatcatttgatgcactaggcgagctt
tcaaaattccaaccaatacagcagatcactgatgccagagctagcaaagtgcccattcat
ggttatttacaaagcaagtttcgtgattcgtcattctatcaaaatgtaggtatttcagaa
ggaccagagttttatgaaggccatttcgttattggctccgagaatgcaataaaggataca
ttcatatcatttcgtggttggaacaaaggggtcgcttttgtgaacaacttcaacatcgga
aggttctggccggcaatgggaccacaatgtgctctttatgttcctgcgccgatcctcaaa
tctggagacaacgttgttgttatctttgaactgcatagtcccaatcctgagcatactatc
aacttggtaaaagatccggatttcacatgtggtccaaatcaatga
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