Brachypodium distachyon (stiff brome): 100828428
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Entry
100828428 CDS
T01717
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
bdi
Brachypodium distachyon (stiff brome)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
TRCF
RecG_dom3_C
UPA
DUF6444
Motif
Other DBs
NCBI-GeneID:
100828428
NCBI-ProteinID:
XP_003577509
UniProt:
A0A0Q3HJ24
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Position
4:complement(18169572..18182805)
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AA seq
826 aa
AA seq
DB search
MATPIPPAPPPNPHHLLLHRPPALTPPRRLRLPIRRPRIASAAAATATATAPDDIAQLNH
RLRVLVRRRDAASSASSASSSMDPVQAEAYLHMIREQQRLGLRQLRRDPAGQKEERDSGV
DDGDEEEEGGGRRKGMAAGSSLGHRVDPRELEPGEYVVHKKVGVGKFVCISGEDGEDYVF
IQYADAMAKLAVDQAARMLYRYNLPHEKKRPRSLSKLNDPSTWEKRRLKGKLAVQKMVVN
LMELYLQRMRQRRSPYTRPEAIDQFAAEFPYEPTPDQNQAFIDVEKDLTERETPMDRLIC
GDVGFGKTEVAMRAIFIVVSAGYQAMVLAPTVILANQHYDVMSDRFSSYPDIKIAIFSGA
QSKEEKDELITQIKSGHLQIIVGTHALLTERMAYNNLGLLVVDEEQKFGVQQKEKIASYK
SSIDVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVAVKTYVSAFSRERALSAIKLEL
KRGGQVFYVVPRIKAIDDVLQFLKDSLPDVPMAVAHGKKVSKNIQLAMEKFSCGEIKILV
CTHIIESGIDIPNANTMIVQYAELFGLAQLYQLRGRVGRSGREGFTYLFYTDKSLLSRIA
MDRLGAIEEHSDLGQGFHVAEKDMGIRGFGSMFGEQQSGDVANVGIDLFFDMLFDSLSKV
DQFCINPVPYKDVQLDINISAHLSSEYISYLENPVELLNEAAKAAEKDIWTLTQFTEDLR
RQYGKEPRDMELLLKKLYVRRMAADLGICRIYPSGKTIIMKTNMNKKVFRLMVEAMASET
HRNSLTLTGKEIKAELLVTLPDTLLLNWLFHCLADCYAVMPALVKY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccacccccatcccccccgctccgccacccaatccccatcacctcctcctccacaga
ccgccagccctaaccccccctcgccgcctccgccttccaattcgccgcccccgtatcgcc
tccgcggccgcggccaccgccacggccacggcccccgatgacatcgcccagctcaaccac
cgcctccgcgtgcttgttcgccggcgcgacgccgcttcctctgcctcatccgcttcctcc
tccatggaccccgtccaggcggaggcctacctccacatgatccgtgagcagcagcgcctc
ggcctccgccagctccgacgggaccctgccggccagaaagaggagagagacagcggcgtc
gacgacggggacgaggaggaggagggcggcggaaggaggaaggggatggcagccgggagc
tcgttggggcaccgtgtggacccgcgggagctggagcctggcgagtacgtcgtgcacaag
aaggtcggcgtcggcaagtttgtttgcatcagcggagaggacggcgaggattacgttttc
attcagtacgccgacgccatggccaagctggccgtcgaccaggccgcgcgcatgctctac
cgatacaacctgcctcatgagaagaagcgtccacggagtctgagtaagctgaatgatcct
tctacatgggagaagaggaggctgaaaggaaagcttgctgttcagaagatggttgtaaac
ttgatggaattatatttacagaggatgaggcaaagaaggtctccatacacaaggcctgag
gcaatcgaccagtttgctgctgaatttccttatgagcctaccccagatcaaaatcaggct
ttcatagatgttgagaaagatctgactgagagagaaacaccaatggacagattgatttgt
ggagatgttggatttggtaaaacggaagttgcaatgcgtgctatattcattgttgtatct
gcaggatatcaagctatggttctcgcaccaactgtgatactagctaatcaacactatgat
gtaatgtctgatcgtttctccagctaccctgatataaaaattgccatatttagtggtgct
cagagcaaggaagaaaaagatgagctaataacacagattaagagtggacatttacaaata
attgttggaactcatgctcttcttacagaacggatggcctataacaatcttggtctccta
gtagtggatgaagaacagaagtttggtgtccaacaaaaggagaagattgcatcctacaag
tcttctattgatgttctcactctctctgcaacaccaattccacgaactttgtatcttgct
ttaactggttttcgtgacgcaagtttaatgtctacaccacctccagaaagagttgctgtc
aagacctatgtgtcagcatttagtagagaacgggccctatcagctatcaaattggagctg
aagcgtggtggtcaagttttctacgttgttcctcgaataaaagcaatagacgatgtattg
caatttctcaaggattctcttccagatgtaccgatggctgttgctcatgggaagaaagtg
tcaaagaatatacaacttgccatggaaaaattctcttgcggggaaataaaaattcttgta
tgcacacacataattgaaagtggaatagatattccaaatgccaacacaatgatagttcag
tatgctgaactatttgggcttgcccagttgtatcagttgcgaggaagagtaggaagatcg
ggcagagagggtttcacatacctcttctacactgataagtctttgctctcaagaattgct
atggatagacttggagctattgaagagcattcggatcttggtcaaggttttcatgttgca
gagaaggatatgggtattaggggtttcggaagcatgtttggcgagcaacaatctggagat
gttgcaaatgttggcatcgatttgttctttgatatgctttttgatagcttgtcaaaggtt
gatcaattttgtattaaccctgttccttacaaagatgttcagctggatataaacatttct
gcacatctctcttctgaatacataagttatcttgagaatcctgttgaattgctcaatgaa
gcagcaaaagctgcagaaaaggatatatggaccttaacacaattcacagaagatcttcgt
cgacaatatgggaaggagccccgtgatatggagttgctattgaaaaagctctatgtgagg
cggatggcagcagatcttggtatctgtcgaatatatccatctggcaaaacgatcatcatg
aaaacaaacatgaacaagaaggtttttaggctcatggtagaagcaatggcttctgaaaca
catcggaactccttaacattgactggaaaggaaattaaggctgaacttctggtcactctg
ccagatacactacttctgaactggctttttcattgcttagcagattgctatgcagtaatg
cccgcccttgtgaagtactag
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