Brachypodium distachyon (stiff brome): 100828584
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Entry
100828584 CDS
T01717
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100828584
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100828584
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100828584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
AAA
DUF3175
Motif
Other DBs
NCBI-GeneID:
100828584
NCBI-ProteinID:
XP_024314074
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All DBs
Position
2:31793327..31797780
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AA seq
873 aa
AA seq
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MPPPPRLDFPAFPFTPYPIQSEFMSFLYAALSSGPRALALLESPTGTGKTLSIICSALQW
LVDHREAAGRGHPDQENGSATVAGGGAGDDDEPDWMRDFTPLLPKPENRKKTKPHPARRQ
EPRNAKDSEKSEGIGGNDSEEEFLLVEYDSDDEEGTRRQSGKRAHCGGGSSSESEDDEGE
EDEAEVTPKVYFTSRTHSQLSQFVGELKKTQFSAKLRMVCLGSRMNLCINNDVRKLGSAN
RINERCLELQKNKKSSKIKVDGDNQKARQAKISCQCPMLRKRSLQKEFRSEVSANGALDI
EDLAQIGKKIGTCPYYGVRDMVPAADLVVLPYQSLLLKSARESLGLNLKNSVIIIDEAHN
LADSLTSMYNSKVTCPQLRAALSHLEAYLDRFQNVLGAGNRRYIQTLIVLTRSFQRVLMS
GEDGSCAVTSVTVNNFLFSLDIDNINIVKLCQYLKESNIIHKVSGYANKLIITQDGASNL
NHQQQHDEGSTISSFQAVANFLRSLLNSNVDGRIIVARQKPGGQPEDAYLKFIMLCPEKI
FSEVTEDAHAVVMAGGTLQPIEETRLRLFPSLSTSDVKFFSCNHIVPAESILPIAVTRGP
SGMEFDFSFGSRRSPAMIEELGRFLCNIVTIVPDGVVMFFTSYEYEKQVYDAWTASGTIS
KISKKKCVFREPKNSVNVEGILNKYKEAIQSCSEHSQGTGVNGALLLAVVGGKISEGINF
SDGMGRCVLMVGLPYPSPDDVELMETIKHIGNHSSSSTVGDNNSLSSQYDHECTVEPGFD
TLRRCGKSGREHYENLCMKAVNQSIGRAIRHVNDYAAMLLVDSRYSSTSSSRSLSCPAEK
LPQWIKRRLTCGKNYGEVHRLLLQFFKINKQMH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgcggctagacttcccggcgttcccgttcacgccgtacccgatccag
tcggagttcatgtccttcctctatgccgctctgtcctccggcccccgcgccctcgctctc
ctcgagagccccaccggcaccggaaagaccctcagcatcatctgcagcgcgcttcagtgg
ctcgtcgaccaccgcgaagccgctgggcggggccaccccgatcaggaaaatggctctgcc
accgttgccggcggtggcgcaggcgacgacgacgagcccgactggatgcgggatttcacc
ccgctgctgccgaaaccagagaatagaaagaagacaaagcctcaccccgcgaggaggcag
gaaccaaggaacgcaaaggattctgagaaatccgaaggaattgggggcaacgacagcgag
gaggaatttttgctggtcgaatacgatagtgatgacgaagagggcacaaggcggcagtcc
gggaagcgggcgcattgtggtggtggtagtagtagtgagagtgaggatgacgagggtgaa
gaggatgaggccgaggtgacacccaaggtgtacttcactagccgcacacattcgcagtta
tcacagtttgttggggagctgaagaagacacagttctcagcgaagctcaggatggtatgc
ttgggatcccggatgaacttgtgcattaacaatgatgttcggaagctggggagcgcgaat
cggatcaatgagaggtgcttggaattgcagaagaataagaagagcagcaaaattaaggtt
gatggtgataaccaaaaggcgagacaagcaaagatatcttgtcagtgtccaatgttaaga
aagagaagtcttcagaaagaattcaggagtgaagtgtcagcgaatggtgcattggacatt
gaggatttggcacaaatagggaagaagattggaacatgtccgtactacggtgtgcgtgac
atggtccccgcagctgatcttgtagtacttccttaccagtctttgttgctgaagtctgct
agagaatcacttggccttaatctgaagaacagtgttatcatcatagatgaggctcacaac
ttagcagactccctcactagcatgtacaactcgaaggtcacatgccctcagttgagggca
gctctttcgcacctagaggcatacctcgatagatttcaaaatgttttgggagctggaaat
cgacgttacatccagaccttgatcgttttaacacggtcgttccagcgagttctgatgagt
ggtgaagatggttcctgcgctgtgacctctgtcactgtaaacaatttcttattctccctt
gatattgataacataaacatagtaaaactttgtcagtatctgaaggaaagcaatataatc
cataaggttagtggatacgccaacaagttgattattactcaagatggtgcaagcaatttg
aatcatcagcagcaacatgatgaaggaagcactatatcaagctttcaggcagtggctaac
tttttacgctccttactgaatagcaatgtggatggaagaattatagttgcacgacagaag
cccggtggacaacctgaagatgcatatcttaaatttattatgctttgtccagagaaaata
ttttcagaggttacagaagatgcacatgcagttgttatggctggtggaaccctgcagcct
attgaagaaacaaggttgcgcttgtttccaagcttatcgactagtgatgtaaaattcttc
tcatgcaaccatattgttccagcggagagtattctgcccatagctgttactcgtggaccg
tcaggcatggaatttgatttcagcttcggttcaaggcggtcccctgccatgatcgaagag
cttggacgttttctttgcaatatagtgaccatagtgccagatggagtagtaatgtttttt
acttcctatgagtatgaaaagcaagtttatgatgcatggacggcttcaggtacaatctct
aaaatttctaagaagaagtgtgttttcagagaacccaaaaacagtgttaatgtcgaaggg
atactcaacaaatacaaggaggcaattcagtcgtgtagcgaacattcacaaggcacaggg
gtcaatggggcacttctattggctgttgttggtgggaagatatctgaaggcataaacttc
agtgatggtatgggtcgctgtgttctaatggttggattgccttatccaagcccagatgat
gtggagctgatggagacaataaagcatataggaaatcattcaagctcatctacggttgga
gataataactccttaagcagtcaatatgaccatgaatgcacagttgagcctggttttgat
acactaaggaggtgcggtaaaagtgggcgagagcattatgagaacttgtgtatgaaagct
gtcaatcaatctattggtagagcaatcaggcacgtaaatgactacgctgcaatgctgttg
gttgactcacgctattcaagcacctcatcaagcaggagtttatcttgtcctgctgaaaag
ttaccccagtggataaagagacgacttacttgtggtaaaaactacggggaagttcatagg
ttgttgcttcagttcttcaaaatcaacaaacaaatgcattga
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