Brachypodium distachyon (stiff brome): 100828701
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Entry
100828701 CDS
T01717
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35A
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100828701
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100828701
Spliceosome [BR:
bdi03041
]
Complex C
Other components
Complex C specific factors
100828701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
SecA_DEAD
UTP25
Peripla_BP_1
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
100828701
NCBI-ProteinID:
XP_003570939
UniProt:
I1HX96
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All DBs
Position
3:complement(2713456..2717616)
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AA seq
613 aa
AA seq
DB search
MAPAAVTPAAKSDDEDNYEEYIPVAKRRAMEADRLRNRRISKPAAASDGSPASLPPPPPP
PPTNSPAPDAAAAKPSLLVTSTQLKRAAPEVTATEQVILQEKEMIENLSDRKTLMSVREL
AKGITYTEPLLTGWKPPLRLRRMPRTKADELRRKWHILVEGDEVPPPARQFQDLRFPEPI
LRMLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPI
VAGEGPFGMIICPSRELAKQTYDVIEMFLAPLKQAGFPEIRPLLCIGGIDMRTQLDVVKR
GVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL
LFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTP
PPVLIFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERQNAIEFFKNGRKDVLVATDVA
SKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLL
KEAKQRIPPVLAELIDPEDAETIAKESGVRGCANCGGLGHRLAECPKLEHEKSVAIAGSR
RDYYGGGGYRGEI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgccgccgtgacgcccgccgccaagtccgacgatgaggacaactacgaggag
tacatcccggtcgccaagcgcagggccatggaggccgatcgcctccgcaaccggcgcatc
tccaagcccgccgccgcctccgacggctcccctgcctccctcccgccaccgccgccgcct
ccgcccacgaacagcccagcccccgacgccgccgccgccaagcccagcctcctcgtcacg
tccacgcagctcaagcgcgccgccccggaggtcaccgccacggagcaggtgatcctgcag
gagaaggagatgatcgagaacctctccgaccgcaagacgctcatgtccgtgcgggagctc
gccaagggcatcacctacaccgagccgctgctcaccggctggaagccgcccctgcggctc
cgccgcatgccccgcaccaaggccgacgagctccgccgcaagtggcacatcctcgtcgaa
ggcgacgaggtacccccgcccgcacgccagtttcaggacctccggttccccgagcccatc
ctccgcatgctccgcgagaagggcatcgtgcagcccacgcccatccaggtgcaggggcta
cctgtggtgctctctggccgtgacatgattggcattgccttcaccgggtccgggaagacg
ctggtgtttgtgctgccgctcattatggtggcgctgcaggaggagatgatgatgcccatt
gtggccggggagggtccgttcgggatgatcatctgcccgtcaagggagctggccaagcag
acgtacgatgttattgagatgttcctcgctccgctcaagcaggctgggttcccggaaata
agaccgttgctttgcattgggggtattgacatgaggacacagctcgatgtggtgaagaga
ggcgtacatattgtggtggccacacctggccggctcaaggatttgctcgccaagaagaag
atgaaccttgacaattgcaggtacttaaccttagatgaagctgacaggcttgttgatctg
ggatttgaagatgacattcgtgaggtttttgatcatttcaaggcacaaaggcaaacactt
cttttttctgccactatgcccaagaagattcagaactttgcaaagagcgcccttgtgaag
ccagtgattgtcaatgttggaagagctggagcagcaaatctagatgtcatccaagaagtt
gaatatgtcaaggaagatgccagaattatatacctccttgaatgccttcagaagactcca
cctcctgttcttatattttgtgaaaacaaagctgatgttgactacatccatgagtatctt
cttctgaagggggtggaagctgttgcaatccatggaggtaaagatcaagaggaaaggcag
aatgcaatcgagttcttcaagaatggaaggaaggatgttctggtggccaccgatgttgcc
tcaaagggtcttgatttccctgatatccagcatgtgattaactatgatatgccagctgaa
atagagaactatgtccacaggattggtcgaactggtcgatgtgggaaaacaggcatagca
actacattcatcaacaagaaccagacagagactacacttcttgaccttaagcacttgctg
aaggaagcgaagcaaagaataccaccagtgcttgctgagctcattgaccctgaggacgca
gaaactatcgccaaggagagtggtgtcaggggatgtgcaaactgtggtggccttgggcat
cgtcttgccgagtgtccaaagctggagcacgagaagtccgtggcaattgcgggctccaga
agagattactacggtggtggaggttaccgaggagaaatatga
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