Brachypodium distachyon (stiff brome): 100829597
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Entry
100829597 CDS
T01717
Name
(RefSeq) ABC transporter B family member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100829597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100829597
04147 Exosome [BR:
bdi04147
]
100829597
04090 CD molecules [BR:
bdi04090
]
100829597
Enzymes [BR:
bdi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100829597
Transporters [BR:
bdi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100829597
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100829597
CD molecules [BR:
bdi04090
]
Proteins
100829597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_21
AAA_15
AAA_16
AAA_23
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_24
DUF87
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
100829597
NCBI-ProteinID:
XP_024315936
LinkDB
All DBs
Position
2:complement(47497285..47504566)
Genome browser
AA seq
1274 aa
AA seq
DB search
MDATAAGGTVATSGEARHRGDQQGKDGRSEKDAAGKKVSLLGMFRYADRLDVLLMVVGTV
GAMGNGVSEPLISVLFGNVINSFGESTSSTVLRSVTKGVLNFIYLGIGTAVASFLQVSCW
TMAGERQSARIRSSYLKSVLRQDIAFFDTEMTTGEAVSRMSSDTVVIQGALGEKAGKLVQ
ISSSFIGGFIIAFTKGWLLTLVMLTSLPLVAITGAVSAQLLTRASSKRLTSYSDAGDTVE
QTIGSIRTVVSFNGEKKAMAMYNNFIKRAYKTVIEEGLINGFGMGSVFCILFSSYGLAFW
YGGKLIIDKGYTGGTIITTLFAVLTGATSLGNATPSISAIAEGQSAAYRLFETIERKPDI
DSDDTSGIVLENIKGDVKLKDVYFRYPARQGQLILDGLSLQVASGTTMAIVGESGSGKST
VISLVERFYDPQAGEVMIDGINIKNLRLDWIRGKIGLVSQEPLLFMTTIKDNIIYGKEDA
TLEEIKRAAELANAANFIDKLPNGYDTLVGQRGTLLSGGQKQRIAIARAILKDPKILLLD
EATSALDVESERIVQEALNRIMVERTTLVVAHRLSTVRNVDCITVVRQGKIVEQGPHYEL
VKDTNGAYSQLIRLQETRGDKRHKIQDSGVPNTSSKSTSLSIRRSMSKDSFGNSNRYSFK
NPLGLSVELHEDENTGGHKKDELTDAKALKKAPIRRLFSLNKPEVPFLLLGSIAAAVHGL
IFPLFAILTSGVIKSFYEPPDKMRKDSSFWALLSVVLGIASLISIPAEYFLFAIAGGKLI
QRVRTLSFQNIVRQEVAWFDNPSNSSGALGTRLSVDALNVRRLVGDNLAIIVQSIATLIT
GFAIAFSADWRLALVITCVIPLVGAQGYAQVKFLKGFSEEAKEMYEDASQVATDAVGSIR
TVASFSAEKRVVRTYNKKCEALRKQGIRSGTVGGLGFGFSFLVSYLTYALCFYVGAQFIR
QGKITFADVFKVLLAFVLAATGVSQSSALASDAAKARDSVISVFSILDRKPKVDSSSCEG
LTLENITGNIDFSNVSFKYPSRPDVQIFSDFTLHIPSRKTIALVGENGSGKSTIISLLER
FYDPDSGRISLDGVEIKSIRISWLRDQMGLVGQEPVLFNDTIRANITYGKHGEVTEEEIM
TIAKAANAHEFISSLPQGYDTFVGEKGVQVSGGQKQRGAIARAIIKDPKILLLLDEATSA
LDAESEHIVQDALDRVMISRTTIVVAHRLSTIKGADMIAVLKEGKIAEKGKHDALMRIKD
GVYASLVELRSNSE
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacagcagcaggaggtactgtcgctactagtggagaagcgcgccaccgcggc
gatcagcaaggaaaggatggccggtcggagaaggacgcggccgggaagaaggtgtcgttg
ctcggcatgttcaggtacgccgaccgcctcgacgtgctgctgatggtggtcggcacggtg
ggggcgatgggcaacggcgtgtcggagccactcatatcggtcctcttcgggaacgtcatc
aactccttcggcgagagcacgagcagcaccgtcctccgcagtgtaaccaagggtgtcctg
aacttcatatatctgggcattggaacagcagttgcctcctttcttcaggtgtcatgctgg
acgatggcaggagaaaggcagtcagcgcgcatccgttcttcttacctgaaatcagttctg
aggcaagatattgcattcttcgatacagaaatgacaactggtgaagcagtttctagaatg
tctagcgacacggtcgtaattcaaggtgctcttggtgaaaaggcagggaagcttgtacag
atctcatctagtttcattggtggttttattatagcattcacaaaaggctggcttctgact
cttgtcatgctaacatcactaccactagttgctattactggtgcagtgtctgcgcagctg
ctaaccagggcttctagcaagagactaacatcatacagtgatgctggggacactgttgag
cagacaattggatctatacgaacagttgtgtccttcaacggtgagaagaaagctatggca
atgtacaacaatttcataaaaagggcatacaagactgttattgaggaaggccttatcaat
ggttttggcatgggctccgtcttttgcatcttatttagcagctatggactagccttctgg
tacggtggaaagctaattattgacaaaggttatactggagggacaatcatcactacttta
tttgccgtgttgactggtgcaacttctttaggtaacgcaacaccatcaatttctgcaatt
gcagaaggtcaatctgcagcatacagactatttgaaacaatcgagaggaaaccggatata
gattcagatgataccagtggcatagttttagaaaatatcaagggtgatgttaagctaaaa
gatgtgtactttcgctaccctgcaagacaagggcagttaatattagatggattgtcattg
caagtagccagtggaacaacaatggccatagttggagagagtggaagtggcaagtcaact
gttataagcttagttgaaagattctatgatccacaggctggtgaagttatgatagatgga
atcaacatcaagaatctgaggcttgattggataagagggaagatcggtcttgtgagccaa
gaaccattgctctttatgaccaccattaaagataacataatctatggcaaagaagatgca
acacttgaagagatcaagagagcagccgaacttgcaaatgccgcaaacttcatcgacaag
ttaccaaatggctacgacacactagttggtcagcgtggcactctgctttctggaggacaa
aaacaaagaattgcaattgcaagggccatccttaaagatcccaaaatccttttgctagat
gaagcaacaagtgcattggatgtggaatctgagaggatagttcaggaggcactcaatagg
ataatggtagaaagaaccacactagtggttgctcatcgcttgagcactgtaaggaatgtt
gactgcatcacagttgttcgtcaagggaaaatagttgaacaaggtcctcattatgaattg
gtgaaggataccaatggagcttactcccagcttattaggctacaagaaactcgtggagac
aaaaggcataaaatacaagattctggagtgccaaatacctcatcaaaaagcactagtttg
tcaattcgacggtcaatgagtaaagattcttttggcaatagcaacagatattccttcaag
aaccctttaggattgtctgtagagttgcatgaggatgaaaacacaggcggacacaaaaag
gacgagcttaccgacgcgaaggcccttaagaaagcaccaattcgacgtcttttttctctt
aacaagccagaggtgccatttcttctgctcggttctatagcggcagcagtgcatggactc
attttcccactgttcgcaatactaacgtctggtgttataaaatcattctacgagccacca
gataagatgcgaaaagattctagcttttgggcactgttatctgttgttctggggattgca
tctctgatttcaatcccagcagagtattttttgtttgcaattgctggaggcaagcttata
cagcgtgtccggacactgtcatttcaaaacattgtgcgtcaagaagttgcttggttcgat
aatccctcaaattccagtggggcacttggcacaaggctctcagttgatgcattaaatgtc
cggcgcttagtaggtgataacctggccattatagtccaatctatagctacattaattact
ggctttgccatagctttttcggcggattggaggcttgcattggttatcacttgtgtcatc
cctttagtgggtgcacagggttatgctcaagtgaagttcttgaaggggtttagcgaagaa
gctaaggagatgtatgaagatgcaagccaagttgcaactgatgctgttggtagtatcaga
acagtagcatcttttagtgcagagaaaagagtggtcagaacatataacaagaaatgtgaa
gctttaaggaaacagggaattcgaagtggaaccgttggagggcttggttttggtttctca
ttcttggtgtcatatctcacatatgctctatgtttctatgttggcgcacagttcatacgt
cagggaaaaataacttttgcagatgttttcaaagttttgttagctttcgttttggcagct
actggggtttcacagtcaagtgcattagcatctgatgcagcaaaggcaagggattccgtc
atttctgttttcagtattctagatcggaagcccaaagttgattcaagcagctgtgagggc
ctaacgttggaaaacattaccggcaatattgatttcagtaatgtcagtttcaagtaccca
tcacgcccggatgtccaaatattcagtgacttcaccttgcacattccttccagaaagacc
atagcacttgttggagaaaatggaagtggcaagtccacaataatttctttactggagcgt
ttctatgatcctgattctggtagaatctcactagatggagtcgaaattaagagcataaga
attagctggttaagggatcagatggggctggtaggccaggagcccgtgcttttcaatgac
accatccgtgccaacataacctatgggaaacatggagaggtgacagaggaagagatcatg
actattgccaaggcagcaaatgctcatgagttcatatcaagcttgccacaaggatatgac
acttttgtcggcgagaaaggagtgcaagtatctggtgggcagaaacagcgaggagctatc
gcaagggccatcataaaggaccctaagatactgctgctgcttgatgaggcaaccagtgcc
ttggatgcagaatctgagcatattgttcaagatgcattggaccgagtcatgatcagcagg
accaccattgtggtggcgcaccgcctctccacaattaaaggggctgatatgattgcagtc
ctcaaggaaggcaaaattgcagaaaaaggaaagcatgatgccctgatgcgaatcaaggat
ggagtctatgcttcgctggttgaacttcgctcaaattctgagtag
DBGET
integrated database retrieval system
