Brachypodium distachyon (stiff brome): 100834008
Help
Entry
100834008 CDS
T01717
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100834008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100834008
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100834008
Membrane trafficking [BR:
bdi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100834008
Atg1 complex
100834008
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100834008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100834008
NCBI-ProteinID:
XP_003569977
UniProt:
I1IC19
LinkDB
All DBs
Position
3:complement(51092423..51097893)
Genome browser
AA seq
537 aa
AA seq
DB search
MASLSDSGGGGGGGGGRSGAELMVPQFHLKALHAILAVRAPRPIATAPASASAAFRRRDR
WFHLPLHAPPPPAAAEHIPEPSLGEPVVVDVYLAPSGGGGREEVVERWTVACEPWPRGAA
SAGEGLAVNKAYKRCITLLRSVYSMLRFLPAYRVFRDLCASGQAYNYEMGYRVGSFAAPF
SRAEEAAMRTQRFAPVETQLGRLVVSVQYLPSLAAYNLEISSLAPVVVIDEYIGSPAAEP
MRAFPASLTEATGSAFPLPSRRPNSWASPAYWPQSPGQPAKFSPSPASYASPTPSPPTFA
GGYLHSRLSGETAPMSIPQASGSRGPVQYRNMSDPSRGFMLPPPSPKSIRGEAGSHESPT
ETSRSFRRAEGLRMADLYANLPAAPKMKDSRDESGRFSGVFSSSGSPRLGISRSSSRLSM
QDDTDDSYLPFAVDDVDAPDSRPGSSGGKEDQSGSSHKSQDAAVGYLVHLLRSARPLRDP
SNSSITSRAESTEAGSTSSFMSRRTSDAFEELESFKEIRENLLARSRSRLQDSLDRS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgtcggactcgggtggcggcggcggcggcggcggcggccggtctggcgcg
gagctgatggtgccgcagttccacctcaaggcgctgcacgccatcctcgccgtgcgcgcg
ccgcggccgatcgcgacggcgcccgcgtcggcgtcggcggcgttccggaggcgggataga
tggttccatctgccgctccacgcgccgccgccaccggccgcggccgagcatatcccggag
ccgtccctcggggagccggtcgtggtggatgtgtacctggccccatcgggcggcggggga
agggaagaagtggtggagaggtggacggtggcgtgcgagccgtggccgaggggagcggcc
tcggcaggggaagggctggccgtgaacaaggcgtacaagcgctgcatcacgctgctgagg
tcggtctactccatgctccgcttcctccccgcgtaccgcgtcttccgcgatctgtgcgcg
tccggccaggcgtacaactacgagatgggctaccgcgtcggctccttcgctgcgcccttc
tcccgtgctgaggaggcggccatgcgcacccaacgcttcgcccctgtcgaaacccagctc
ggccgcctcgtcgtttccgtccagtacctccccagcctcgctgcctacaacttggaaatc
tcctcgctcgcgcccgtcgttgtcatcgacgaatacatcgggagccctgcagcggagcct
atgcgcgccttcccggcctcgctcacggaggccaccggctcggccttcccgctgccgtcg
cggcgcccgaacagctgggcgtcgcctgcttactggccacagtcaccggggcagccagcg
aagttctcaccttccccagcgtcatatgcgtctcccacaccctctcctcccacgttcgcc
ggtggctacctacattctcgtctgagcggggagactgcaccaatgagcataccacaagcg
agtggcagtagggggcctgtccaatatcggaacatgtcggatcctagcaggggtttcatg
ctacctccaccttcaccgaagagcatcagaggagaggcagggtcacatgagtcaccgaca
gagaccagccggtcattccggagggcagaagggctccggatggccgatctctacgctaac
ttacctgctgctccaaagatgaaggacagtagggatgaatctggcaggttctcaggtgtt
ttctcctctagtggttccccgcgacttgggatttcaagaagttcaagcagactgtctatg
caggatgatactgatgattcatatcttccttttgctgtggatgatgttgatgcacctgat
tccagacctgggagcagtggtggtaaggaggatcagtcaggttcctcccataaatcacaa
gatgctgccgttggctatcttgtccacctgctgaggtctgcacgtccattgagagatcct
agcaattcatctattacatcaagggccgaatctactgaagcaggcagcaccagctcgttc
atgtcccgtaggacatctgatgcatttgaggagcttgaatcttttaaagaaataagggaa
aacctgcttgcccgtagtagatctagactccaagattcattggatagatcctag
DBGET
integrated database retrieval system