KEGG   Brachypodium distachyon (stiff brome): 100834008
Entry
100834008         CDS       T01717                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    100834008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100834008
   03029 Mitochondrial biogenesis [BR:bdi03029]
    100834008
Membrane trafficking [BR:bdi04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    100834008
   Atg1 complex
    100834008
Mitochondrial biogenesis [BR:bdi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    100834008
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 100834008
NCBI-ProteinID: XP_003569977
UniProt: I1IC19
LinkDB
Position
3:complement(51092423..51097893)
AA seq 537 aa
MASLSDSGGGGGGGGGRSGAELMVPQFHLKALHAILAVRAPRPIATAPASASAAFRRRDR
WFHLPLHAPPPPAAAEHIPEPSLGEPVVVDVYLAPSGGGGREEVVERWTVACEPWPRGAA
SAGEGLAVNKAYKRCITLLRSVYSMLRFLPAYRVFRDLCASGQAYNYEMGYRVGSFAAPF
SRAEEAAMRTQRFAPVETQLGRLVVSVQYLPSLAAYNLEISSLAPVVVIDEYIGSPAAEP
MRAFPASLTEATGSAFPLPSRRPNSWASPAYWPQSPGQPAKFSPSPASYASPTPSPPTFA
GGYLHSRLSGETAPMSIPQASGSRGPVQYRNMSDPSRGFMLPPPSPKSIRGEAGSHESPT
ETSRSFRRAEGLRMADLYANLPAAPKMKDSRDESGRFSGVFSSSGSPRLGISRSSSRLSM
QDDTDDSYLPFAVDDVDAPDSRPGSSGGKEDQSGSSHKSQDAAVGYLVHLLRSARPLRDP
SNSSITSRAESTEAGSTSSFMSRRTSDAFEELESFKEIRENLLARSRSRLQDSLDRS
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggcgagcctgtcggactcgggtggcggcggcggcggcggcggcggccggtctggcgcg
gagctgatggtgccgcagttccacctcaaggcgctgcacgccatcctcgccgtgcgcgcg
ccgcggccgatcgcgacggcgcccgcgtcggcgtcggcggcgttccggaggcgggataga
tggttccatctgccgctccacgcgccgccgccaccggccgcggccgagcatatcccggag
ccgtccctcggggagccggtcgtggtggatgtgtacctggccccatcgggcggcggggga
agggaagaagtggtggagaggtggacggtggcgtgcgagccgtggccgaggggagcggcc
tcggcaggggaagggctggccgtgaacaaggcgtacaagcgctgcatcacgctgctgagg
tcggtctactccatgctccgcttcctccccgcgtaccgcgtcttccgcgatctgtgcgcg
tccggccaggcgtacaactacgagatgggctaccgcgtcggctccttcgctgcgcccttc
tcccgtgctgaggaggcggccatgcgcacccaacgcttcgcccctgtcgaaacccagctc
ggccgcctcgtcgtttccgtccagtacctccccagcctcgctgcctacaacttggaaatc
tcctcgctcgcgcccgtcgttgtcatcgacgaatacatcgggagccctgcagcggagcct
atgcgcgccttcccggcctcgctcacggaggccaccggctcggccttcccgctgccgtcg
cggcgcccgaacagctgggcgtcgcctgcttactggccacagtcaccggggcagccagcg
aagttctcaccttccccagcgtcatatgcgtctcccacaccctctcctcccacgttcgcc
ggtggctacctacattctcgtctgagcggggagactgcaccaatgagcataccacaagcg
agtggcagtagggggcctgtccaatatcggaacatgtcggatcctagcaggggtttcatg
ctacctccaccttcaccgaagagcatcagaggagaggcagggtcacatgagtcaccgaca
gagaccagccggtcattccggagggcagaagggctccggatggccgatctctacgctaac
ttacctgctgctccaaagatgaaggacagtagggatgaatctggcaggttctcaggtgtt
ttctcctctagtggttccccgcgacttgggatttcaagaagttcaagcagactgtctatg
caggatgatactgatgattcatatcttccttttgctgtggatgatgttgatgcacctgat
tccagacctgggagcagtggtggtaaggaggatcagtcaggttcctcccataaatcacaa
gatgctgccgttggctatcttgtccacctgctgaggtctgcacgtccattgagagatcct
agcaattcatctattacatcaagggccgaatctactgaagcaggcagcaccagctcgttc
atgtcccgtaggacatctgatgcatttgaggagcttgaatcttttaaagaaataagggaa
aacctgcttgcccgtagtagatctagactccaagattcattggatagatcctag

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