Brachypodium distachyon (stiff brome): 100834637
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Entry
100834637 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100834637
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100834637
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100834637
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100834637
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100834637
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100834637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
100834637
NCBI-ProteinID:
XP_003574957
UniProt:
I1I9L4
LinkDB
All DBs
Position
3:complement(44299937..44308105)
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AA seq
1001 aa
AA seq
DB search
MGKKLKTKAKKAQQREPLAAAGSGDAGLQEASNSTEEAAVSASDWQQCGHYGRDSPHLDK
VLREIMSSKHLASCEHCREDAPRKKGGKQQKKKGGGGAAKAQAKVEKSDMWICLDCGRHF
CGGAVSETKPYGHARRHAKQDRHWWAARYDEPTVAYCLSCENKVSIEMPIVDTVVPAPAD
DKVFGAVDSNALVLANCHGNVIRGLPNLGNTCFFNAVLQSLLALDRLRSKMSGPDVPAGA
LAMLLKKLFLETSASNDAGGALSVKSLFSSICSKYPQFRGYQMQDSHELLRCFLDGLRTE
ETEARKLLEDASNSGAPTIVDSIFGGQLSSTVSSTECTHGSVKHDQFLDLSLPVPSRRPP
AKSVSSPPAKRTKQSIRDRNKNRRYGKITTTRISPTIVENSKEKAETVAECNDSQILGSE
LGQIVSEKEPEPSEGSESCASVPKQELNAASYVEDDISWLDFVADADETKSEILDSVCST
EAGQIWDRNGEMHGSYDTRDDTLPKEKVMSSEHSCENIVDDAACSQPVILLPYKEFCTTA
DEICETVRSSQCPKDVGPAPDISPVTENNTHPVSGGNGEQDDYIGLGDMFNEPEVTSEAK
KETTAGVIDVMAWSSNSADDEVDDSNALVSVEGCLALYTEPELLSELWHCEHCSSAVARP
NTNEGKEGDEMVASASDRKDSEKMMASGDARQGGDKVTANCSKKEDIGQIMTTDGCSDNV
DPDLCCNKWECANPDAENTSNGNSPDTRNGTLLNTVFTVDAIEQPDSKHDGHTVDIAAEE
ASAPVSCGDNDPASSSTTIDRMVESGANAEEVVTSSLPSQTQTILPSVKDNEDVITRNMG
RGKRMKMAGRAHKGQDNQNKQKEDETKVFRAAMRRILISKAPPVLTITLNRFSQDPHGRF
KKLKGHVCFKEMLDVRSFIDPRSKESDNTTYRLVAVVEHMGTMTGGHYVAYVRSGKIGGR
QQQSRASKSWFYASDAQVREASLEEVLNCEAYILFYERVAE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagctgaagaccaaagccaagaaagcgcagcagcgggaaccgctggccgct
gctggatccggcgatgcggggttgcaggaagcgagtaactcaacagaggaagcggctgtg
tcagccagcgactggcagcagtgcggccactacgggcgtgacagtccccacttggacaag
gtcctccgggagatcatgtcttccaagcatctcgcttcgtgcgagcattgccgagaggat
gccccacggaagaaaggcggtaagcaacagaagaagaaaggaggtggaggtgctgccaag
gcgcaggcaaaggtcgagaagagtgatatgtggatctgcttggactgcggtcggcatttc
tgtggtggtgcggtgtctgagaccaagccatacggccatgccagaaggcatgccaagcaa
gacaggcattggtgggctgcacggtatgatgaaccaactgttgcatattgcttgtcatgt
gaaaataaggtgtctatcgagatgcctatagtagatacagttgtgccagctccagctgat
gataaggtgtttggtgcagtagatagcaatgcactagttttggctaattgccatggtaat
gtgattagagggctgccaaatcttggaaacacatgcttcttcaatgcggtgctccagagc
ctcctcgcacttgataggttgcgcagcaagatgtcaggaccagatgttccagcaggagcc
cttgcaatgttactgaagaagctctttttggaaaccagtgcttcaaatgatgcaggaggt
gcacttagcgtgaagagcctcttctcaagtatttgctcaaagtatccgcagtttagaggc
taccagatgcaggacagccatgagttactccgttgttttcttgatggtttgcgcacggag
gaaactgaagcacggaagctactggaggatgcttccaattcaggggctcctacaattgtt
gattccatctttgggggtcagctgtctagtactgtgtccagcacagagtgcacacacggg
tctgttaaacatgaccaattccttgatctatcactacctgttccatcaaggaggcctcca
gccaagagtgtttcatcaccaccagccaagagaaccaagcagtctatacgagataggaac
aaaaatcgcagatatgggaagataactaccaccagaatatctcctacaatagtggagaat
agcaaagaaaaagctgaaacagttgctgaatgcaatgattctcagattctgggttcagaa
ctgggacagattgtcagtgagaaagagcctgagccctctgagggcagtgagtcatgcgct
tctgttcccaaacaagaactgaatgctgcttcatatgtggaggatgacatttcctggtta
gattttgttgctgatgcagatgaaacaaagtctgagattcttgattctgtgtgttctact
gaagcaggacagatctgggacaggaatggtgagatgcatggttcatatgacactcgagat
gatactttgcccaaagagaaggtcatgagttccgagcactcatgtgagaacatcgttgat
gatgcagcttgttcacagcctgttatcttgcttccttacaaagaattttgtacaacggcc
gacgaaatttgtgaaactgtaagaagctcacagtgtccaaaagatgttggtcctgctcca
gacatttctccagtaacagaaaataatacacatcctgtatctggtggaaatggagaacaa
gatgactatattggtcttggtgatatgtttaatgagcctgaagtaacttctgaagctaag
aaagaaactacagctggagttattgatgtcatggcttggagtagcaacagtgctgatgat
gaggtggatgatagtaatgctctcgtatcagttgagggctgcttagctttgtatactgag
ccagaactgctatctgagttgtggcattgtgagcactgttctagcgctgttgcacgccca
aataccaacgaaggaaaagagggtgacgagatggtggctagtgctagtgacagaaaggac
agtgagaaaatgatggcaagtggcgatgcaagacaaggtggtgataaggttaccgcaaac
tgcagcaaaaaggaggatattggtcagattatgacaactgatggttgctctgacaatgta
gaccctgacttgtgctgtaacaaatgggagtgtgcaaatcctgatgctgaaaacacctct
aatggtaattctccagacactagaaatggtactttactgaatacagtgtttactgttgat
gcgattgaacagccagacagtaaacatgatgggcataccgtggatatagctgctgaagaa
gcaagtgcaccagtgagttgtggtgataatgaccctgcctcttccagtactactatagac
agaatggttgagtctggtgccaatgctgaagaagttgtgactagtagccttccatcgcag
acacaaaccatcttaccgagtgtcaaagataatgaagatgtcatcacgaggaatatgggc
agggggaagcgaatgaagatggctggcagggcacacaaagggcaagataaccaaaataaa
cagaaagaggatgaaacaaaagttttcagagctgcaatgagaagaattcttatcagcaag
gcaccacctgtattgacgattactttgaacagattcagccaagacccccatggccggttc
aagaaattgaaagggcatgtgtgctttaaggagatgctcgatgtacggtcattcatagac
ccaagatctaaggagagtgacaacaccacttatcggctagttgctgttgtcgagcacatg
ggaaccatgacaggagggcattatgttgcatatgtaagatctggcaagatagggggtcgg
cagcagcagagccgcgcctccaagtcttggttttatgcaagcgatgcacaagtcagagaa
gcctctctggaggaggttcttaactgtgaggcttacattcttttttacgaaagggtggct
gagtaa
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