Brachypodium distachyon (stiff brome): 100839193
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Entry
100839193 CDS
T01717
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100839193
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100839193
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Aminotran_3
NosD
Motif
Other DBs
NCBI-GeneID:
100839193
NCBI-ProteinID:
XP_003565790
UniProt:
I1HFL6
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Position
2:complement(12334803..12336558)
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AA seq
417 aa
AA seq
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MALCNDATWLVFILVAMCAVSGAKRPVAKESAGPAPAPAPEEASGDGGTFDITKLGAASD
GKTDCSKELEEAWKSACGAAGQHTVVIPKGEFLCGPVNFSGPCEGDVTIQIDGTLLATND
LPKYGGGSWINILKVDNLVITGSGTLDGQGSNVWTKDPQAKAGYPNTLVLDYVKNGSVSG
ITLLNSKFFHMNIYMSSDVKIDNVTITAPGDSPNTDGIHIGDSSNIHVTGATIGTGDDCI
SIGGGSASITVTGVTCGPGQGISVGCLGRYKDEKDVSDVTVKDCVLRSSTNGVRIKTYVD
AVKSITASNLTFENIKMEDVANPIIIDQNYCPEKICTAKSKSAVTVKDIIFRNITGTSST
PEAVSLLCSEKQPCSGVELIDVNVEYSGKNNKTMGVCTNAKGIAKDTLQALACVSDV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtgcaacgatgcaacgtggcttgtgttcatccttgtggccatgtgcgccgtg
agcggggcgaaaaggcccgtagccaaggagagcgccggtcctgctcctgcccctgcaccg
gaggaggcgtccggcgatggtgggaccttcgacatcaccaagctcggcgcagccagcgac
ggaaagacggactgctcaaaggaactggaggaggcgtggaaatcggcgtgcggggcggcc
gggcagcacacggtggtgatccccaagggggaatttctgtgtggacctgtcaacttcagc
gggccgtgcgagggcgatgtgactatccagatcgacggcaccttgctggccaccaacgac
ctgcccaagtacggcggtggtagctggatcaacatcctcaaggttgacaacctggtcatc
accggctccggcacgctggacggccaaggatctaacgtttggaccaaggatccccaggcc
aaggccggctatcccaacacgctggtgctggactacgtgaagaacgggagcgtgtcgggc
atcacgctgctcaactccaagttcttccacatgaacatctacatgtcgtcggacgtgaag
atcgacaacgtgaccatcacggcgcccggggacagccccaacacggacggcatccacatc
ggcgactcctccaacatccacgtcacgggcgccaccatcggcacaggggacgactgcatc
tccatcggtggcgggagcgccagcatcaccgtgaccggggtgacctgcgggccgggtcag
gggatcagcgtggggtgcctgggcaggtacaaggacgagaaggacgtgtcggacgtgacg
gtcaaggactgcgtgctccggagtagcaccaacggcgtccggatcaagacctacgtggac
gccgtcaagtccatcacggcctccaacctcaccttcgagaacatcaagatggaggacgtg
gccaaccccatcatcatcgaccagaactactgccccgagaagatctgcaccgccaagagc
aagtccgccgtcaccgtcaaggacatcatcttccgcaacatcacggggacgtcatccacg
ccggaggccgtcagcctgctctgctccgagaagcagccctgcagcggcgtcgagctcatc
gacgtcaacgtcgagtacagcggcaagaacaacaagaccatgggggtgtgcaccaacgcc
aagggcattgccaaggacaccctccaggccctcgcctgcgtctctgatgtgtga
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