Brachypodium distachyon (stiff brome): 100842033
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Entry
100842033 CDS
T01717
Name
(RefSeq) ABC transporter B family member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100842033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100842033
04147 Exosome [BR:
bdi04147
]
100842033
04090 CD molecules [BR:
bdi04090
]
100842033
Enzymes [BR:
bdi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100842033
Transporters [BR:
bdi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100842033
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100842033
CD molecules [BR:
bdi04090
]
Proteins
100842033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_15
AAA_16
AAA_21
AAA_24
DUF87
AAA_23
MMR_HSR1
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100842033
NCBI-ProteinID:
XP_024315938
LinkDB
All DBs
Position
2:complement(47467675..47476628)
Genome browser
AA seq
1198 aa
AA seq
DB search
MLPVIPLFVPEVSCWTMAGERQSARIRSLYLKSVLRQDIAFFDTEMTTGEAVSRMSSDTV
IIQDALGEKAGKLVQLSSGFIGGFIIAFTKGWLLTLVMLTSLPLVAIAGAVSAQLLTRTS
SKRLTSYSDAGDIVEQTIGSIRTVVSFNGEKKAMAMYNNFIKRAYRTVIEEGLINGFGMG
SVFCISFSSYGLAFWYGGKLIIDKGYTGGTIITVLFAVLTGATSLGNATPSVSAIAGGQS
AAYRLFGTIERKPDIDSDDTSGMVLENIKGDVELKDVYFRYPARPGQLILDGLSLQVASG
TTMAIVGESGSGKSTIISLLERFYDPQAGEVMIDGINIKNLRVDWIRGKIGLVSQEPSLF
MTTIKENIIYGKEDATLEEIKRAAEHANAANFIDKLPNGYDTLVGQRGTLLSGGQKQRIA
IARAILKDPKIILLDEATSALDVESERIVQDALNRIMIERTTLVIAHRLSTVKNVDCITV
VRQGKIVEQGTHHTLVKDTNGAYSQLIRLQDTRGDKRHKIQDSGVPNSLSKSTSLSIRQS
MSKDSFGNSNRYSFKNPLGLSVELHEDENTGGQKKDELTDRKALKKGPIGRLFYLNKPEL
PFLLLGSIAAAVHGIIFPLFGILMSSVIKSFYESPDKLRKDSNFWALISVVLGIASLISI
PAEYFFFGIAGGKLVERVRILSFQNIVRQEIAWFDNPSNSRYHIQMIINSLYFVIILRFT
QILRFCFTTYSGAIGTRLSIDALNVRRLVGDNLAIMLQSIATLITGFVIAFSTDWRLALV
ITCVIPLVGAQGYAQVKFLKGFSEDAKEMYEDAGQVATDSVGSIRTVVSFSAEKRVVTTY
NKKCEALRKHGVRSGIVGGLGFGFSLLVLYLTYALCFYVGAQFVHQGKMAFSDVFKVFFA
LALAAVGVSQASALASDATKATDSAISVFSILDQKSKVDSSSSEGLTLENITGNIDFSNV
SFKYPSRPDVQIFSDFTLNIPSRKTIALVGESGVGKSTIIALLERFYDPDSGRISLDGVE
IKSIRISWLRDQIGLVGQEPVLFNDTIRANITYGKHGEVTEEEIMAVAKAANAHEFISSL
PQGYGTLVGEKGVQLSGGQKQRVAIARAIIKDPKILLLDEATSALDTESERIVQDALDRV
MVSRTTIVVAHRLSTIKRADMIAVLKEGKIAEKGKHEALMRIKDGAYASLVELRSNSE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttacctgtcattcctttatttgttccagaggtgtcatgctggacgatggcaggagaa
aggcagtcagcacgcattcgttctctttacctgaaatcagttctgagacaagatattgct
ttcttcgacacagaaatgacaactggtgaagcagtttctagaatgtctagcgatacagtc
ataattcaagatgctcttggtgaaaaggcaggaaagcttgtacaactctcatctggtttc
attggtggttttataatagcttttacaaaaggctggcttctgactcttgtcatgctaacg
tcgctaccactagttgctattgccggtgcagtgtctgcgcagctgctaaccaggacttct
agcaagagactaacatcatatagtgatgctggggacattgttgagcagacaattggatct
ataagaacagttgtttccttcaatggtgagaagaaagctatggcaatgtacaacaatttc
ataaaaagggcatacaggactgttattgaggaaggccttatcaatggttttggcatgggc
tctgtcttttgcatctcatttagcagctatggcctagccttctggtacggtggaaagcta
atcattgacaaaggctataccggagggacgatcatcactgttttatttgccgtgttgact
ggtgcaacttctttaggtaacgcaacaccatcagtttctgcaatcgcgggaggtcaatct
gcagcatacagactgtttggaacaattgagaggaaaccagatatagattcagatgatacc
agtggcatggttttagaaaatatcaagggtgatgttgagctaaaggatgtgtactttcgc
taccctgctagacctggacagttaatattagacggattgtcattacaagtagccagtggt
acaacaatggccatagttggagagagtggaagtggcaagtcaactattataagcttactt
gaaagattctacgatccacaggctggtgaagttatgatagatggaatcaacatcaagaat
ctgagggttgattggataagagggaagattggtcttgttagccaagaaccatcgctcttt
atgaccaccattaaagagaacataatatatggcaaagaagatgcaacacttgaagagatc
aagagagcagctgaacatgcaaatgcagcaaacttcatcgacaagttaccaaatggctac
gatacattagttggtcagcgtggcactcttctttctggaggacaaaaacaaaggattgca
attgcaagggccatccttaaagatccaaaaattattttgctagatgaagcaacaagtgca
ttggatgtggaatctgagaggatagttcaggacgcactcaatagaataatgatagaaaga
accacactagtcattgctcatcgtttgagcactgtaaagaatgttgactgcatcacagtt
gttcgtcaagggaaaatagtcgaacaaggtactcatcatacattggtgaaggatacaaat
ggagcttactcccagcttattaggctacaagacactcgtggagacaaaaggcataaaata
caagattctggagtgccaaattccttatcaaaaagcactagtttgtcgattcgacagtca
atgagtaaagactcttttggcaatagcaacagatattccttcaagaaccctttaggatta
tctgttgaattgcatgaggatgaaaacacaggcggacagaaaaaggacgagcttactgat
cggaaggcccttaagaaaggaccaattggacgtcttttttatcttaacaagccagagttg
ccatttcttctgcttggttctatagcggcagcagtgcatggaatcattttcccactgttc
ggtatactaatgtctagtgttataaaatcattctatgaatcaccagataagctgagaaaa
gattctaacttttgggcattgatatctgttgttctggggattgcatctctgatttcaatc
ccagcagaatattttttctttggaattgctggaggcaagcttgtagagcgtgtccgaatt
ctgtcctttcaaaatattgtgcgtcaagaaatcgcttggtttgataatccctcaaattcc
aggtatcatattcaaatgataataaatagtttatattttgtcatcatacttagatttacg
caaatactaagattttgctttaccacttacagtggggcaattggtacaaggctttcaatt
gatgcattaaatgtccggcgcttagtaggagataacttggccattatgttgcaatccata
gctacattaatcactggcttcgtcatagctttttcgacagattggaggcttgcactggtt
atcacttgtgtcatccctttagtaggtgcacaaggttatgctcaagtgaagttcttgaag
gggtttagtgaagacgctaaggagatgtatgaagatgcaggccaagttgcaactgattct
gttggtagtatcagaacagtagtatcttttagtgcagagaaaagagtggttacaacatat
aacaagaaatgtgaagctttaaggaaacatggagttcgaagtggaatcgttggagggctt
ggttttggtttctcattgttggtgttatacctcacatatgctctatgtttctatgttggt
gcacagttcgtacatcaggggaaaatggctttttcagatgttttcaaagttttttttgct
ttagctttagcagctgttggggtttcacaagcaagtgcattggcgtctgatgcaacaaag
gcaacggattctgccatttcagttttcagtatcctagatcagaagtccaaagttgattca
agtagcagtgagggcctaacattggaaaacattactggcaacattgatttcagtaatgtc
agttttaagtacccatcacgccctgatgtccaaatattcagtgactttaccttgaacatt
ccttccagaaagaccatagcactcgttggagaaagcggagttggcaagtctacaataatt
gctttactggagcgtttctatgatcctgattctggtagaatctcactagatggagtcgaa
attaagagcataagaattagctggttaagggatcagatagggctggtaggccaggagccg
gtgcttttcaatgacaccatccgtgccaacataacctatgggaaacatggagaggtgaca
gaggaagagatcatggctgttgccaaggcagcaaatgcccatgagttcatatcaagcttg
ccacaaggatatggcactttggtcggtgagaaaggagtgcaactatctggtgggcagaaa
cagcgggtagctattgcaagggcgattataaaggaccctaagatactgctacttgatgag
gcaaccagtgccttggatacagaatctgagcgtatcgttcaagatgcattggacagagtc
atggtcagcaggaccaccattgtggtggcgcaccgcctctccacaattaaaagggctgat
atgatagcagtcctcaaggaaggtaaaattgcagaaaaaggaaagcatgaggccctgatg
cgaatcaaggatggagcctatgcttcgctggttgaacttcgctcaaattctgagtag
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integrated database retrieval system
