Bdellovibrio sp. KM01: HW988_01485
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Entry
HW988_01485 CDS
T08445
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_01485
DNA repair and recombination proteins [BR:
bdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HW988_01485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
zf-ribbon_3
DZR
AAA_30
AAA_22
AAA_16
E2R135
AAA
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
QLY25750
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Position
282973..284697
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AA seq
574 aa
AA seq
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MYQLRPYQQEAVQATLQHFRKEKSPAVIVLPTGAGKSLVIAELARLARGRVLVMAHVKEL
VEQNHAKYISFGLEAGIFSAGLERKDSSQKVIFGSIQSIARAEEEFFQNFSLVVIDECHR
VSMEGETQYFQVVSKLQKHNPEICVLGLTATPYRMGLGWIYQYHVTKKLQQTTEERFFKK
CIYELSIGYMIKNKYLTPPLKIDSPVACYDFSSLKLHGTSYVTAQIEALLKDQKRITPLI
IKNIVDMSVERHGVMIFTSSVNHAVEIMKSLPPYVSALVVGDTEIQERDEIIEAFKERKL
KYLVNVSVLTTGFDAPHVDVIAVLRPTESVSLYQQIIGRGLRLSPGKSDCLILDYTGQNH
DLFAPEIDDDKPTSGSVMVEVPCPECGTVNNFWGIKDHEGEVEEHFGRRCKGAFQDPVSG
EIEACGFRFRFKRCPDCGHENDIAARICEGCQAVLVDNDKKLKEAMALKDAHVLRVDSVT
YSKGYDKKGNERLEVKYYDVDAKALTEYFYLNSASDSRAFYFNFTRMHQRLPGKKIFIKS
ADEAINLKDQFRSPMFVIARKQKSFWAIREKIFE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagttgcgcccgtaccaacaagaagcggtccaagcgacccttcagcactttcgc
aaagaaaaatcgccagcggtgattgtgctgccaacgggtgcaggtaaaagcctggttatt
gccgagcttgcacgtctggcgcggggtcgcgttctggtcatggcgcatgtcaaagaactc
gtcgaacaaaatcacgcaaagtatatttcctttggcttggaggctgggattttctctgcg
ggattggagcgcaaggattcttcccaaaaagttatttttggaagtattcagtcgatcgct
cgtgccgaggaggaattctttcagaatttctcattggttgttatcgacgaatgtcatcgt
gtttccatggagggtgagactcagtattttcaggtcgtttccaaattgcaaaagcacaat
cctgagatttgtgtcttgggtttgacggcgacaccttatcggatggggcttggctggatc
tatcagtatcacgtgacgaaaaagttgcagcaaacgactgaagagcgcttttttaaaaaa
tgtatctatgagctttcaattggatacatgattaagaataaatatttgacgccaccattg
aaaattgattctccggtagcctgttatgacttttccagtttgaaactgcatggcaccagt
tatgtcacagctcagattgaagctttattgaaagatcaaaagcggatcacgcctttgatt
attaaaaacatcgtagatatgtctgtggaacgtcatggtgttatgattttcaccagctcg
gtcaatcacgctgtagaaattatgaaaagcctgcctccctatgtttcggcgttagtggtg
ggggacactgaaattcaagagcgcgacgaaatcatcgaggcatttaaagagcgcaaactt
aagtacctggtgaacgtctcggttttaacgacggggtttgatgctcctcatgtggatgtt
attgcagttttaagacccacggaatctgtgagtttgtatcagcagattatagggcgcggt
ttgcgactcagtccgggaaaatctgattgtctgatattggattatacgggtcagaaccat
gacctatttgcacctgaaattgacgatgacaaaccgacttctggttccgttatggtggaa
gttccatgccctgaatgtggaacagttaacaatttttggggtatcaaagatcacgaaggc
gaagtggaagaacactttggacgtcgctgtaagggagcctttcaagatcccgtcagtggc
gagatcgaagcctgtggatttcgatttcgctttaaacgctgtcccgattgtggacatgaa
aatgatatcgcggctcgaatttgcgaaggttgtcaggctgttttagttgataacgataaa
aagcttaaagaggcgatggcattaaaagatgcccacgtgcttcgcgtagactcggttacc
tactccaagggatatgataaaaagggcaatgagcgtttggaagttaaatactatgatgtc
gatgcgaaagctttgaccgaatatttctatctgaattctgcatctgacagtcgtgctttt
tattttaacttcacccgtatgcaccagcgcctgccgggcaaaaagatcttcatcaagtcc
gcggatgaggctatcaatcttaaagatcagttccgatctcctatgtttgtaattgcccga
aaacaaaagagcttctgggctattcgcgagaagattttcgagtaa
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