Burkholderia dolosa: AK34_26
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Entry
AK34_26 CDS
T03793
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl00300
Lysine biosynthesis
bdl00470
D-Amino acid metabolism
bdl01100
Metabolic pathways
bdl01110
Biosynthesis of secondary metabolites
bdl01120
Microbial metabolism in diverse environments
bdl01230
Biosynthesis of amino acids
Module
bdl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AK34_26 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AK34_26 (dapF)
Enzymes [BR:
bdl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AK34_26 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AJY13175
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All DBs
Position
1:complement(29022..29891)
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AA seq
289 aa
AA seq
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MKLSFTKMHGAGNDFVVLDGYSRALPPLTQAQVRALANRHFGIGADQLLVVEKPTVDGAD
FKYRIFNCDGGEVEHCGNGARCFVKFVSDRGLTDKRSVRVQVMKGLITLTMQDNGEVVVD
MGAPVFEPAQVLFDASGLEGRPEGRDTLWPLDVGGATRWISTVSMGNPHAVQVVDDAEAY
PVLDEGPLIERHARFPQRVNAGFMQIVSRHEVKLRVYERSAGETLACGTGACAAVAAGIR
RGLLDSPVAVHTHGGTLTIGWDGARDETAALTMAGPAETVFEGEIDLNA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactctcgttcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tattcgcgcgcgctgccgccgctcacccaggcgcaggtacgcgcgctcgcgaaccggcac
ttcggcatcggcgccgaccagctgctggtggtcgagaagccgaccgtcgacggcgccgac
ttcaagtaccggatcttcaactgcgacggcggcgaagtcgaacactgcggcaacggtgcg
cgctgcttcgtgaagttcgtcagcgaccgcgggctcaccgacaagcgcagcgtccgcgtg
caggtgatgaagggcctgattacgctgacgatgcaggacaacggcgaagtcgtcgtcgac
atgggcgcgccggtgttcgagcccgcgcaggtgctgttcgacgcgtccggcctcgaaggg
cgcccggaaggccgcgacacgctgtggccgctcgacgtcggcggcgcgacgcgctggatc
tcgacggtgtcgatgggcaatccgcacgcggtgcaggtggtcgacgatgccgaagcttat
ccggtgctcgacgaaggtccgctgatcgaacgccacgcgcgctttccgcagcgcgtgaac
gccggcttcatgcagatcgtgtcgcgccatgaggtgaaactgcgcgtgtacgaacgcagc
gcgggcgaaacgctcgcgtgcggcaccggtgcgtgcgcggcggtcgcggccggcatccgg
cgcgggctgctcgattcgccggtcgcggtgcacacgcacggcggcacgctgacgatcggc
tgggacggcgcgcgcgacgaaaccgccgcgctgacgatggccgggcccgccgagaccgtg
ttcgaaggcgagatcgacctgaacgcgtaa
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