KEGG   Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0300
Entry
BBDE_0300         CDS       T04222                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn02024  Quorum sensing
bdn03060  Protein export
bdn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bdn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BBDE_0300
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BBDE_0300
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BBDE_0300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bdn02044]
    BBDE_0300
Enzymes [BR:bdn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BBDE_0300
Secretion system [BR:bdn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BBDE_0300
  Eukaryotic Sec-SRP protein
   BBDE_0300
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 nSTAND3 ArsA_ATPase cobW AAA_31 MeaB AAA_24 Zeta_toxin APS_kinase AAA_18
Other DBs
NCBI-ProteinID: BAQ26294
LinkDB
Position
complement(392584..394227)
AA seq 547 aa
MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTGRIRER
ALGTEVSQALNPAQQVVKIVNEELTDVLGAGVDRPLNFAKNPPTIIMLAGLQGAGKTTLA
GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSAGGEAVASPG
LTTGDPVKVARDSVAFARQKLYDTVIIDTAGRLGVDEELMRQARDIRDAVQPNEILFVID
AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF
EVFHPDRMASRILDMGDILTLIEQAQKQFDEEEARKAAVKISDGSFGLDDFLDQLQQVRK
LGPMKNLLGMIPGMAAHRKELEQFDEKEIDRTEAIIRSMTPAERRDPSIIDGSRRARIAY
GSGVTVSQVNALLQRFEQASKMMRRMSNKAGAGMPGFGGPSMGGGKGKSKKGKKKGSKSG
NPMKREAEEKALRDKLAGKNSGGKSSGSAFAKKPQNPALPAGLQDVMGDSGTELPPNFGG
GLSGLLH
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcagcatttagttctttgacagacaggctctcgaatgccttcaagcatctgaagagc
aaaggcaagctttccgaggccgatatcgacggtacgatccgtgagattcgccgcgcgctg
ctcgacgccgatgtggcgctcgacgtggtgcgttcctttaccggccgtatccgcgagcgt
gcgctcggcactgaggtttcgcaggcgctgaatccggcgcagcaggtcgtgaagatcgtc
aacgaagagctcactgacgtgctcggcgccggcgtggatcgtccgctgaacttcgcaaag
aatccgccgacgatcatcatgctcgcaggccttcagggcgccggtaagacgacgctcgcc
ggcaagctgggctattggctgaaggattccggccataccccgctgcttgtcgcggccgat
ttgcaacgtccgaacgcggtgacgcagttgcaggtggtcggcgagcgcgccggcgtaccg
gtgtatgcgccggaaaagggcgtgcagtccgccggcggtgaggccgttgcctctccgggc
ctgaccaccggagacccggtgaaggtggcccgcgattccgtggcgttcgccaggcagaag
ctgtatgacacggtcatcatcgataccgcaggccgtctcggtgttgatgaggaactgatg
aggcaggcccgcgatatccgcgatgccgtgcaaccgaatgagatcctgttcgtcatcgac
gcgatgatcggtcaggatgccgtgcagacggcgaaggcgttcgacgaaggcgtggacttc
accggcgtggtgctttccaagcttgatggcgatgctcgtggcggtgccgcgctttccgtc
gcatccgttaccggcaagccgatcctgttcgcttcgacgggcgaaggattgaaggatttc
gaagtcttccacccggatcgcatggcttcccgcatcctcgacatgggcgatatcctcacc
ctgatcgagcaggcgcagaagcagttcgatgaggaggaggcccgtaaggccgccgtgaag
atttccgacggctccttcggtcttgacgatttcctcgaccagctgcagcaggtgcgcaag
ctcggcccgatgaagaatctgctcggcatgattcctggcatggccgcgcaccgtaaggaa
cttgaacagttcgatgagaaggagatcgaccgtaccgaagccatcatccgttcgatgact
ccggcggagcgacgcgatccttcgattatcgacggttcccgtcgcgcccgtatcgcctac
ggttccggcgtgaccgtctcgcaggtcaatgcgctgttgcaacgtttcgagcaggcctcg
aagatgatgcgccgcatgagcaacaaagccggtgccggcatgcccggtttcggcggcccg
tccatgggtggcggcaagggcaagagcaagaagggcaagaagaagggttccaagtccggc
aatccgatgaagcgcgaggctgaggagaaagcattgcgggacaagctcgccggcaagaac
tccggcggcaagtcgagtggctccgctttcgccaagaaaccgcagaatccggcgcttccg
gctggtttgcaagatgtgatgggcgattcgggcacggagttgccgccgaacttcggcggc
ggtctgtccggtctgctgcactga

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